Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02415 ATGGCTCAAGCTTCAGCTTCAGCTGCTTCTTCTATTGAATCCTCAAATGGTTATATCTCCTGTGATTTTGGCTTCTATTCCAACTTAGGGCAACCAAGAGGACAATGGGAACTAGGATCAGTACAGCCAACTTCAGGAGAGGAAGCATATATTTCACTCTCAAATGGAAATTTTGTAAAAGTGGCCACATCAAAACTTGTACCAACCAATCCTGATATTTTAGAGGGTGTAGATGATCTTATTAAAATTGGTTATTTGAATGAGCCATCAGTTCTTCATAATCTTAAGCTTAGATATTCTCAGGAGATGGTTTATGTATGA 321 0.3738 MAQASASAASSIESSNGYISCDFGFYSNLGQPRGQWELGSVQPTSGEEAYISLSNGNFVKVATSKLVPTNPDILEGVDDLIKIGYLNEPSVLHNLKLRYSQEMVYV. 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02415 106 ProSiteProfiles Myosin motor domain profile. 75 106 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca12g02415 106 Gene3D Kinesin motor domain 29 106 IPR036961 -
Seca12g02415 106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 105 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02415 Seca-Chr12 35992090 35995268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02415 32 106 Myosins gene family AT1G50360 56.000 1.60e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02415 K10357 - gmx:100802074 126.716