Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02414 ATGACAGAAAAACATCCCTGGAACCTTATGGCTACACCACCTGACGAAGGACAACTTATAAGCATGCTGCTTAAGCTCATCAATGCAAAGAACACCATGGAAATTGGTGTCTACACTGGTTACTCTCTGCTTTCCACTGCCCTGGCTCTTCCCTCTGATGGAAAGATATTGGCTATGGACGTGAACCGCGAATACTATGAGTTGGGATTGCCCATAATTGAAAAAGCTGGTGTGGCTCACAAAATTGACTTCAGAGAAGGACCTGCTCTGCCTCTTCTTGACGAATTGCTTAAAGATGAAAGTAAGAAGGGAGCATTCGATTTCATTTTTGTGGACGCTGATAAGAATAACTACTTAAATTATCACAGGAGAGTGATTGATCTTGTGAAGGTTGGGGGGCTAATCGGCTACGATAACACCCTATGGAATGGATCTGTAGCGGAGCCACCTGATGCTCCTATGTTGGATTACATTAAGCATTGTCGCGGTCATTTGATGGAGCTCAACAAGTATCTGGCTGCTGATTCTAGGATCGAGATTTGCCAGCTACCCGTTGGTGATGGGATTACCCTGTGCCGCCGCATCGTCTGA 591 0.4552 MTEKHPWNLMATPPDEGQLISMLLKLINAKNTMEIGVYTGYSLLSTALALPSDGKILAMDVNREYYELGLPIIEKAGVAHKIDFREGPALPLLDELLKDESKKGAFDFIFVDADKNNYLNYHRRVIDLVKVGGLIGYDNTLWNGSVAEPPDAPMLDYIKHCRGHLMELNKYLAADSRIEICQLPVGDGITLCRRIV. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02414 196 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 195 IPR002935 GO:0008171
Seca12g02414 196 Gene3D Vaccinia Virus protein VP39 1 196 IPR029063 -
Seca12g02414 196 PANTHER O-METHYLTRANSFERASE-RELATED 2 195 - -
Seca12g02414 196 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 194 IPR029063 -
Seca12g02414 196 Pfam O-methyltransferase 2 195 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02414 Seca-Chr12 35978517 35980389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02414 1 195 Monolignol Biosynthesis Gene Families AT4G34050 76.923 9.08e-115 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02414 K00588 - gmx:100795858 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02414 12 35978517 35980389 Seca12g02414 12 35978517 35980389 ECH