Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02410 ATGGCAGGCATCCGAAAAATCGCGGCTAGCATAATTCGAGCAACAAATCATGGTGACTTAACTCAGAGAATCAATCTAACTCCATGGGATCTCCAATTACTCAAAATTGAAGCAATCCAACAAGGGCTTCTTTTCCATAAACCCGAAACAAAAGACACAACAAACCGAATCCAGCACCTCAAACACTCCCTTTCCTCCACTCTTTCCTTCTTCCCACCCCTCGCAGGCCGTCTCGTCATTACTGAACACAAAGATAACACTGCCTCCTCTTTCATCGCTTGCAACAACGTAGGTGCACTCTTTGTCCATGCCACAGCTGAGAAAACCAGAGTTGCTGATATCCTTCAACCCAACTACGTCCCTTCCATTGTCCACTCTTTCTTTCCACATAACGGCGTTAGAAACTACGAAGGCACATCACAGCCATTACTAGCAGTGCAAGTGACGGAGCTACTTGACGGCATTTTCATCGGCTGCGCAATTAACCACGTGGTCGCCGACGGCAAGTCGTTTTGGCATTTCATCAATTCATGGGCTGAAATCTCACGGGGTTTGGATAAAGTAACCAAACTCCCTGCACTTGATCGTTGGTTTCCAGATGGAATTAACCATCCCATACGCTTTCCTTTCAAAAAGGAAGAGAAGAGGAAACTGTGTGAACTTCCACCTCTTCGGATCTTCCATTTCACAAAAGAGAAAATTGCGCGACTCAAATCAAAAGCAAATGCAGAGGTTGGGATGGAAAGAATCAGAATATCTTCCTTGCAAGCACTTTTAACTCACTTTTGGCGTTTTGTGATAGGTAGGCAACATGTTGACCCACATGAAGAGACCCGTTACATGGTAATCATGGACGTTAGGCATAGGATGTGCCCATCATTGCCAGAGAATTATTTTGGAAACGCAGGAATGGTTGGGCTTGTCATCATGAAAGCAGGGGAATTGCTGGACGGTGGGCTGGGGAAGGGTGCTCTGGGAATGAACAAGATGATTTCTTTGCACTCTGGTGAGATGGTAAGGAACCACTACGAGTCTTGGTTGAAAACCCCATCTGTGATAACGCCGGGTATGGCGTCTAGAAGTAATGCGTTGCTCACCAACAGTTCCCCAAGGTTCAACTTTTATGGTAATGACTTTGGTTGGGGAAAGCCTGTGGCAGTTAGAAACGGTGTTGCAAACAAAACTAGCGGTAAGATTACTGTTTTTGGTGGGGCGGAAGAAGGTAGTGTTGATGTTGAAGTCTGTCTTCCTTATGAGATTTTGGAGGCCATGGGTAATGACCTTGTGTTCTTGGATGCCATGTGCTAG 1308 0.458 MAGIRKIAASIIRATNHGDLTQRINLTPWDLQLLKIEAIQQGLLFHKPETKDTTNRIQHLKHSLSSTLSFFPPLAGRLVITEHKDNTASSFIACNNVGALFVHATAEKTRVADILQPNYVPSIVHSFFPHNGVRNYEGTSQPLLAVQVTELLDGIFIGCAINHVVADGKSFWHFINSWAEISRGLDKVTKLPALDRWFPDGINHPIRFPFKKEEKRKLCELPPLRIFHFTKEKIARLKSKANAEVGMERIRISSLQALLTHFWRFVIGRQHVDPHEETRYMVIMDVRHRMCPSLPENYFGNAGMVGLVIMKAGELLDGGLGKGALGMNKMISLHSGEMVRNHYESWLKTPSVITPGMASRSNALLTNSSPRFNFYGNDFGWGKPVAVRNGVANKTSGKITVFGGAEEGSVDVEVCLPYEILEAMGNDLVFLDAMC. 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02410 435 Gene3D - 217 426 IPR023213 -
Seca12g02410 435 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 11 430 - -
Seca12g02410 435 Pfam Transferase family 8 425 - -
Seca12g02410 435 Gene3D - 3 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02410 Seca-Chr12 35944905 35946212 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02410 43 419 Monolignol Biosynthesis Gene Families AT5G48930 27.342 1.85e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02410 - - gmx:100797643 530.02