Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02379 ATGAATGAATTTTGTGAAGGTTCATGTGTTAGCCTTGATGACGATAATATAGATATTAATGTTACTGGTGATGAATTTGATGTAAACCATAGTGAAGATGAAAATGATTCGGGTGGTCCTAGTGTGGAGGAAGAGTTAGGTAGAATGGATCATAGAGGTAAAAGAATGGAAGATTTGACTCTTGTTGATATTCGAAACATGGAGTTTGCTAGTGAAGAGCATGGGGAGATATTTTATAGGGCATATGCAAAGCGTCATGGATTTGTTGTTAGAAAGGATGAGATTGATCGGGACATTAAGGGCAATGTTATTATGCGTCAGTTTGTTTGCAACAAAGAGGGTAGTAGGAACAAAAAACATTTGATGAGGGTGGATAGGAAAAAAGAACATAGGCCATTAATGCGTCTGGATTGTCAAGCTAAGATACGAATTCGCTTAGATTATAAGACAGATAAATGGAAAGTGGTTTCTTTTGTGGAGACCCACAATCATGAGCTTACCCCTTCTACTTTTGTGCACTTACTACCTAGTAATAGAGGGTTGAATAATGCTGATAAAGCCCAAGTAGGGAGGTTGCATGCATATGGTGTAAGAACGTGTCACATAATGGGGTACATGCTAGATCAAAAAGGGGGATATGGTTCCCTCGGGTATAAAACTATTTTATACCTTTTGCAAAATGTGGAAGTGAAAGTGTGTGGTACTCAAGAAAGGCAGAAAAAACAATTCTCACAAGATGTGGAAGTGAAAGTTAGTGGTACTCATGAAGGGAAGGAGAAGGAATGCACCCAACAAGTGGAAGTGAAAGTCAGTGGTAGTCATTATGGGAAGGCAAGGGAATGCACACAAAATGTTAGTTTGAATCATAATGTGGGTAATAAAGGGAAGGAAAAGGAGGTTCATGTCTTGCCACAAAATTCAGTCCAAAACTCTGTAAGTCCAAATAGGAGGTTAAATGATAAAATTTGTCCTATTGCTCCTTCTTTTATGCGCCCCTTTCACAACTCTATATTTGGTCCTGGTATGCCAAGCCAAACGATGCCTATGCCCCATCCTCAGTACGGTTATGTTCCTATGTACCCAACCGGTTATCCCATGGTTTACCCTAATATGGTTATGCAAAACCCACAGAAAGCTCCTGCTGGTACTTCTTTGGATCATTTGCGTGGTGTAGTCAATAATAATGGAAAAGGAGTAGGTAGCAAACCTGCTGAGCATATGAAAACCAAGGATTGA 1236 0.3956 MNEFCEGSCVSLDDDNIDINVTGDEFDVNHSEDENDSGGPSVEEELGRMDHRGKRMEDLTLVDIRNMEFASEEHGEIFYRAYAKRHGFVVRKDEIDRDIKGNVIMRQFVCNKEGSRNKKHLMRVDRKKEHRPLMRLDCQAKIRIRLDYKTDKWKVVSFVETHNHELTPSTFVHLLPSNRGLNNADKAQVGRLHAYGVRTCHIMGYMLDQKGGYGSLGYKTILYLLQNVEVKVCGTQERQKKQFSQDVEVKVSGTHEGKEKECTQQVEVKVSGSHYGKARECTQNVSLNHNVGNKGKEKEVHVLPQNSVQNSVSPNRRLNDKICPIAPSFMRPFHNSIFGPGMPSQTMPMPHPQYGYVPMYPTGYPMVYPNMVMQNPQKAPAGTSLDHLRGVVNNNGKGVGSKPAEHMKTKD. 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02379 411 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 211 - -
Seca12g02379 411 MobiDBLite consensus disorder prediction 25 50 - -
Seca12g02379 411 Pfam FAR1 DNA-binding domain 78 167 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02379 Seca-Chr12 33972618 33977117 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g02379 FAR1 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02379 - - ccaj:109792835 223.016