Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02343 ATACATAGTGTCCATATAGGAAGTGATTACATTGCCAACACTTATTCTCAAACGCCAATTAGAGTAGCACACTATGACATTCCATCATACATAGACTTAATGGTTTTTCAAGCCTCAAACTTCTTGCAGGAACTTTATGGATCGGGAGCTAGAAGGACTGGAGTTATTGGTTTTCCACCAATAGGGTGTGTGCCCTCACAGAGAACAATTGGTGGAGGAATACAGAGAGCATGTTCTGATTCTGAAAACCAAGCAGCAATCCTCTCCAATACAAAGCTCTTATCTCAAATGGATGCCCTTAAAGAACCTAACTCGAAGGTTATTACTATATGA 333 0.3994 IHSVHIGSDYIANTYSQTPIRVAHYDIPSYIDLMVFQASNFLQELYGSGARRTGVIGFPPIGCVPSQRTIGGGIQRACSDSENQAAILSNTKLLSQMDALKEPNSKVITI. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02343 110 PANTHER GDSL ESTERASE/LIPASE EXL3 3 108 - -
Seca12g02343 110 Gene3D SGNH hydrolase 1 110 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02343 Seca-Chr12 33082055 33082839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02343 4 95 Pollen Coat Proteome AT1G75910 33.333 3.94e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02343 - - gmx:100810354 138.658