Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02341 ATGGCAACTCTTCAGCTCTACACAATTCTACTCTCCTTGTATTTACTGGCTTTTCTTCTTCAATTCTCATCACTCCAGTTTCCCTCACTCGGGTACAATTTCCCAGATAAGTATTTCATCAATTGTGGTTCGGAAAGTGATGTAACTGAGAGTGGCCACCTTTATGTTGGGGAATCAAACCCTATAGCCAGTTTCAGCAGCAACAGCAATAGAGAAAGCAATCAATCAACAGTGCCTTCACCTCTGTACCAAACAGCAAGAATTTTTCGAAGTCAATCTTGGTATGAGTTCAGTACTGATATCAATAGCACCTACCTGCTACGCCTCCATTTCTTTGCTTTCTCGTCACCAACTAATCTTTCCACAGCTAAGTTCAACGTTTCTGTTCCTGGCTTCTGGCTTTTGCCAAATTTGGATGCCAGAAACACTACTAACTCTGCTTTAGTGAAAGAGTTCTACATGAAAATCACTCGCCCCAAATTCAAAATCACTTTCACGCCTCTAGCATCATCATTTGCGTTTGTAAATGCTATAGAACTCTTCCTACTCCCCCTCTGTTTTATCTCAAATGAAGTCGCACGTTTCACTTATGGTGCTTCTGGACACTTGTCTACTTACAGTGGGGACTTTCTCTCTCGGACATTGGAAGCCAAACATAGGATCAACGTTGGTGGCCAAACAGTGACAAGGGGCAACGATAACTTATTGAGAAACTGGCTTCCTGATGATAGTTTTCTCACTAATCCGAGAAACGCGAAGAATAGTTCCCAGTACAATGGTGAAATTAAGTACCATGCTAGCGATGACTCTGATGGTCCAAATTCAAATCGATATACTGCGCCAAATGCTGTCTACCAAACTGCTAAAGAGATTAATAACATCTCTGCCATTGCCGCTGCAGAGTTAAACATAACTTGGGGTCTTCCGGTGGAGAAGAACACAGATCATCTCGTTCGGCTTCACTTTTGTGACATTTTTAATTCACAGGCTGGTCTTACAATCGTTAAACTGTTCATTTACGACACTCATGTTACTATCAATGTTAACGGTTTAGAAGAGTTGCATAGTCCTTATTTTTATGATTTTGTGGTTCAATCTGATGACTCTGGGTTCATGAGGATCAGCGTAGCACCTAATGCATCTAATCTTAAACCAAATGCGTTTTTGAACGGACTAGAAATAATGAAACTGATTGAATCATCAGGTTCTGCTCCCCAGGACCTGGATGACTCCAACTCCAACCATAGTAGTCTTCCCGTGGTGCTGGGTTCAGCTCTTGGAGGTTTAGTTCTGGTTTCTGTTGTGATAGCTGGTGGGTTTCTTTGGCGTCTTAAAATCACCACTTCTCACAGGAGATTGACCGAGGGAACCGTTCATGACTCCTCTCTCTCCAATATAAATCTTGGGCTGAAAATCTCCTTGCTGGATCTTCAATTGGGAACCGAGAACTTCGATGAAAAGCAGATAATTGGCAAGGGTGGTTTTGGTACTGTCTATAAAGGAGTTCTCAAGAATGGTGTGACAGTGGCTGTGAAAAGAAGTGTGCCAGGATCAGGTCAAGGCCTTTTAGAATTTCGCACTGAGATTATGGTTTTATCCAGGATTCGTCACAACCACCTTGTTTCCTTAATTGGGTATTGCGATGAAAGGAATGAGATGATACTGGTTTATGAGTACATGGAGAAAGGAACACTTAGAGACCATTTGTACAATACAAATTTGCCAACCTTGTCTTGGAAGCAGAGGCTTGAAATTTGCATTGGAGCTGCCAGAGGTCTTCATTACCTTCACAAAGGAGTAGCTGGGGGAATTATTCACCGTGATGTGAAATCAACCAACATATTGCTTGATGAGAACCTTGTGGCGAAAGTTGCTGACTTTGGCCTCTCAAGGACAGGTCCTGATAATCATCAACCATATGTCAGCACAGTTGTTAAAGGCACTTTTGGGTACCTTGATCCTGAGTATTTTAGGTTGGAACAGCTGACAGAAAAATCTGATGTGTACTCATTTGGGGTAGTTCTTCTGGAAGTGTTATGTGCAAGACCTGTCATTGATCAGTCGCTTCCAAGGGAGCTGGTCAACTTGGTTGAGTGGGGAATGCTTTGCAAAAGCAAGGGAATACTCGATGGGATCATTGATCCTACCATCAAGGGCCAAATAAATCAAAACTCACTTAGAAAATTTAGTGAGGCAGTAGAAAAATGCTTACAAGAACATGGTTATGATAGGCCTACAATGGGTGATGTGTTGTGGGACTTGGAGTATGCGCTGCGGCTTCAGCAAGCTGCAGTACACGGAGAGCCACATGAGGATAGTTCTAGCAGCGCCTCTGCTTCACTGCAATTGCCCAATGTTCGGCGTCTTCCTTCATTCTCTAGTCTAAGTGAAGTGGATGCCTTGTCAATTGTGAGGAGTGATGATTGA 2427 0.4277 MATLQLYTILLSLYLLAFLLQFSSLQFPSLGYNFPDKYFINCGSESDVTESGHLYVGESNPIASFSSNSNRESNQSTVPSPLYQTARIFRSQSWYEFSTDINSTYLLRLHFFAFSSPTNLSTAKFNVSVPGFWLLPNLDARNTTNSALVKEFYMKITRPKFKITFTPLASSFAFVNAIELFLLPLCFISNEVARFTYGASGHLSTYSGDFLSRTLEAKHRINVGGQTVTRGNDNLLRNWLPDDSFLTNPRNAKNSSQYNGEIKYHASDDSDGPNSNRYTAPNAVYQTAKEINNISAIAAAELNITWGLPVEKNTDHLVRLHFCDIFNSQAGLTIVKLFIYDTHVTINVNGLEELHSPYFYDFVVQSDDSGFMRISVAPNASNLKPNAFLNGLEIMKLIESSGSAPQDLDDSNSNHSSLPVVLGSALGGLVLVSVVIAGGFLWRLKITTSHRRLTEGTVHDSSLSNINLGLKISLLDLQLGTENFDEKQIIGKGGFGTVYKGVLKNGVTVAVKRSVPGSGQGLLEFRTEIMVLSRIRHNHLVSLIGYCDERNEMILVYEYMEKGTLRDHLYNTNLPTLSWKQRLEICIGAARGLHYLHKGVAGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPDNHQPYVSTVVKGTFGYLDPEYFRLEQLTEKSDVYSFGVVLLEVLCARPVIDQSLPRELVNLVEWGMLCKSKGILDGIIDPTIKGQINQNSLRKFSEAVEKCLQEHGYDRPTMGDVLWDLEYALRLQQAAVHGEPHEDSSSSASASLQLPNVRRLPSFSSLSEVDALSIVRSDD. 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02341 808 ProSiteProfiles Protein kinase domain profile. 484 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g02341 808 SUPERFAMILY Protein kinase-like (PK-like) 473 776 IPR011009 -
Seca12g02341 808 CDD STKc_IRAK 490 755 - -
Seca12g02341 808 SMART serkin_6 484 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g02341 808 Pfam Malectin-like domain 40 396 IPR024788 -
Seca12g02341 808 Pfam Protein tyrosine and serine/threonine kinase 487 750 IPR001245 GO:0004672|GO:0006468
Seca12g02341 808 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Seca12g02341 808 Gene3D Transferase(Phosphotransferase) domain 1 560 778 - -
Seca12g02341 808 FunFam Putative receptor-like protein kinase 213 398 - -
Seca12g02341 808 PANTHER OS07G0166700 PROTEIN 471 761 IPR045272 GO:0004714|GO:0006468
Seca12g02341 808 FunFam Receptor-like protein kinase FERONIA 560 776 - -
Seca12g02341 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Seca12g02341 808 FunFam receptor-like protein kinase FERONIA 447 559 - -
Seca12g02341 808 Gene3D Phosphorylase Kinase; domain 1 446 559 - -
Seca12g02341 808 Gene3D - 215 398 - -
Seca12g02341 808 Gene3D - 37 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02341 Seca-Chr12 32989154 32991601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02341 32 794 Receptor kinase-like Gene Family AT2G23200 44.458 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca12g02341 Malectin_like 8.8e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02341 - - gmx:100789555 1005.36