Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02340 ATGACCCCATTCTTCTACACCCTTCTCACTATTCTTTTCCTTGTCACTGTGAAGTTACTGTTCCCAACAAGAAGACTCAGAAACCTTCCTCCAGGTCCACCATGCATTCCCCTAATCGGCAACCTCTACCAACTCAAACGCCCACTCCACCGCACCCTCCACCGCCTATCCGAAAAACACGGCCAAGTCTTCTCTCTCTGGTTCGGCTCCCGTTTCGTGGTCGTCGTTTCATCACCTTCCGTCGTTCATGAATGCTTCACCAAAAACGACATCATCCTAGCAAACCGTCCGCCGCTTCTCGCCGGTAAGCACATCGGCTACAATTACACAACCGTAACGGCCGCCCCTTACGGCGACCACTGGCGCAACCTCCGCCGCATCATCTCACTCGAGGTCCTCTCAACGCACCGTCTCAATTCCTTCTATGAAATCAGAAGAGACGAGATTACGAAGCTAGTTCAAAACCTAGCTCGTGAATCGATCAACGATTTTGCAAAGGTGGAACTGAAATCCAAGTTTTCAGAGATGACGTTTAACACTGTAATGAGAATGATCTCTGGAAAGAGGTACTATGGAGAGGATTGTGATGTGACGGATGTGGAGGAAGCGAGACAATTCAGAGAGCTAATGAAAGAGCTTATAACATTAGTAGGAGCCAGCAATCCTGCTGAATTTGTTCGTGTTCTTCGGTGGTTTGATTTTGATAATTTGGAGAAGAGGCTAAAGAGGATTAGTAGCAGGAATGATGCGTTTTTGCAAGGACTCATTGATGAGCATCGAAGTGGGAAACAGAGCGGTAGCAATACCATGATAGATCATCTATTGAGTCTGCAACAAACACAGCCAGAATATTATACGGATCAAATCATCAAAGGGATTATTCTGGTAAGTAACCGTTGCTATTGCTATGGTAAGGTTATGCTCCTTGGAGGCACAGAGACATCAGCGACAACTATAGAATGGGCAATGTCTGCTTTACTAAATCATCCAGAAGTGTTGAAGAAGGCAAGGGATGAATTAGATACTCAAATAGGACAAGTTCGTCAAGTAGAAGAGTCAGATATTTCAAAACTTCCTTACCTTCAAAATATTATCTCTGAGACATTTCGGTTATACCCTGCATTCCCATTGTTGTCACCACACTTTTCTTCAAAAGATTGCACCATTGGAGGATATAATGTCCCACGAGGTACTATTTTGTTGGTTAATGCTTGGGCCATTCATAGAGATCCTCAACTATGGAGCGACCCTACACAATTTAAGCCTGAGAGATTTGAGAAAGAAGGGGAGGCGGATAAGTTGATACCGTTTGGGTTAGGAAGAAGGGCTTGTCCTGGAGCAGGATTCGGGCAGCGTACAGTGAGTTTAACTTTGGGCTTATTGATTCAATGTTTTGAGTGGAGACGAATAAGTGAGGAAGAAATTGATATGACTGAAGGAAAGGGAGGTACCACACCAAAGCTAATTCCTTTAGAGGCCATTTGTAAAGCACGTTCAAATATCATCAACGAGGTTTTTCTAAAGGCCGGTGAAAACAAGAGAATGAAATAA 1551 0.4423 MTPFFYTLLTILFLVTVKLLFPTRRLRNLPPGPPCIPLIGNLYQLKRPLHRTLHRLSEKHGQVFSLWFGSRFVVVVSSPSVVHECFTKNDIILANRPPLLAGKHIGYNYTTVTAAPYGDHWRNLRRIISLEVLSTHRLNSFYEIRRDEITKLVQNLARESINDFAKVELKSKFSEMTFNTVMRMISGKRYYGEDCDVTDVEEARQFRELMKELITLVGASNPAEFVRVLRWFDFDNLEKRLKRISSRNDAFLQGLIDEHRSGKQSGSNTMIDHLLSLQQTQPEYYTDQIIKGIILVSNRCYCYGKVMLLGGTETSATTIEWAMSALLNHPEVLKKARDELDTQIGQVRQVEESDISKLPYLQNIISETFRLYPAFPLLSPHFSSKDCTIGGYNVPRGTILLVNAWAIHRDPQLWSDPTQFKPERFEKEGEADKLIPFGLGRRACPGAGFGQRTVSLTLGLLIQCFEWRRISEEEIDMTEGKGGTTPKLIPLEAICKARSNIINEVFLKAGENKRMK. 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02340 516 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 FunFam Cytochrome P450 family protein 21 501 - -
Seca12g02340 516 SUPERFAMILY Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 Pfam Cytochrome P450 30 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g02340 516 PANTHER CYTOCHROME P450 82C3-RELATED 13 499 - -
Seca12g02340 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Seca12g02340 516 Coils Coil 333 353 - -
Seca12g02340 516 CDD CYP81 61 491 - -
Seca12g02340 516 Gene3D Cytochrome P450 23 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02340 Seca-Chr12 32960036 32962567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02340 7 504 Cytochrome P450 AT4G37340 57.677 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02340 K13260 - gmx:100811727 722.62