Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02321 ATGTTTCAGTATTTTTTGGAGCAGTTGAAAGTGCCACGAGTGGAGTCAAAATTAAGAGTATTCTCTTTCAAGATTCAGTTTGGGACTCAGATTACAGAGTTCAAGAAGAGTTTAAACACGATGAACTCTGCCTGTGAGATTATTAAGAAAATTCTTTATTTGGGCAATACATTGAATCAAGGGATAGCAAGGGGTATATCATTTTTCGTACTTTATATCCAATAG 225 0.3467 MFQYFLEQLKVPRVESKLRVFSFKIQFGTQITEFKKSLNTMNSACEIIKKILYLGNTLNQGIARGISFFVLYIQ. 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02321 74 Pfam Formin Homology 2 Domain 3 65 IPR015425 -
Seca12g02321 74 SUPERFAMILY Formin homology 2 domain (FH2 domain) 3 65 - -
Seca12g02321 74 Gene3D Formin, FH2 domain 2 71 IPR042201 -
Seca12g02321 74 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 74 IPR015425 -
Seca12g02321 74 PANTHER FORMIN-J 3 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02321 Seca-Chr12 32157020 32157427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02321 3 65 FH2 protein (formin) Gene Family AT5G07740 75.342 4.05e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02321 - - pop:18105776 108.997