Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02317 ATGATGCTTAGGAAAACCTTAGAGACACCCTTGGGGGAAGAAGAGAGCCAAAGAGAGAACCTATTCCACACTAGGTGCCACATTGCAGATAAGGTCCAACCCTCTGAAGTAATACAACCTTCTGAAGAGATGAACTTACTGAAGGATCAAGTGCTTGCTAAAGTTTTCAACCTTCTGATATCAAGAAACGAAGCATCAAATTTCTATACAAAGTCTTGTTTCTTTGATACCTTTGAAGGATTAAGTCTTGTACAGCTTTTTGCTATTCTATCTGCTCATTTCTCCTTCTGGAAAGTCAAGTCAGAAGCTTTTGCTGAACTTAGAAGAGATCATGCCTTGAGACAAAGAGAATTACAAAGGTACAAGAATGAGAATAAGAGGTTAGATGAAGATGAACTAAGTTGGGAAGTTATATTATCGGAAAAGGTTGGGGAAGAGTGTATCATCCCAGGCGAGAAACAAGGGAAATTTTGTGGCTCTCTGGACGTTTTTCGCCTAGGCGAGAAGCCTCTCGCCTGGGCGAGAATAGAGAGAGAGAGAGATTCTAGAGAGAGAGGTCGAGGAGCAAGAGGAGAGCCAGCCAAGCCAAGATTCATTCTGCACGACCTTCCGCAACCCCTTTCCCCTTTCTCCATTGTTAATCTAGAGGTGAGTAAAGCTCACACACTTTCACTCCATCTTGTGTATGCTCTTCCTGATGAACCCTATCTCTTACCTCCCTTTTCTAGAGCTTTGAAACAGAGAAACCCCCGTGCCCCTTTCTTCACTAAACCCCTTGTGCCCCTTTCTTCACTAAACCAACCGTTTCCCCTTTCTTCACTAAGCTGTCTCCGTCGCGTCCCTGCCGCCGTCTGCCTTCTTCGTCCGTCTTTGGCCGCTGTGTCGTCGCCTCTGTGCCTGCTCCAGGTTGCGACGTTGCCTGCTCTGTTCTACAACTGCGATGCTCCCGTCGCCTATGTGCCTGCTCCGTGCTGCAACTGTGACGCCGTCCACTCTGCTGCTGTCGCCGTCGTGCCTCCGTCCGTGACCTTTTGCTGCTTGCGCCGTCGTGCCTCCGTTCGTGCCCTAACTATAGTGTTGGTTGAGGCTGTTTCTCTACTTGTTGAGTTTTACTTGGCTTCATACAGAAATTTGACGGGGACAGTATATAATGTCACTACTTCTGATGTACAGGCTACTTTGTGGGTTCAAACACCAGATCTTCGAGAACAGTATATAGGCATTGCCAATGTGCAGGCAACAAGTAGTGATTGGGTTCAGATGCAGGGGAATTTCCTTCTAAATGGCTCCCAATCAAAAGTCATTGTTTATTTAGAAGGTCCTCCTCCAGGCGTTGACATTCTTGTCAATACTTTTGTGTTGTCCACTGCAAATGTTGTGTCGGTGAACTTGTTCCCTATAGCGGCGAACATGTTCCGTACATCGAATCCATTTCTTGCTGATTTTCGATTTTCCATATTCCTTGATTCCCAAGACAGCAATAAGGTTTTTCCCCCTTTGTTGAATTTGTTGTATGCGATGAAGATCGAGGAATTGGAGGATTCAGAGTGTAGTAGGGATGAAGAGGAGAAATACGCACTACAACAATTTTGGGATATTAGAGCACTGTCTTTAGGGCGCTCCCGTTTCTCTTCTCCGGCGCGGTTTCCACCTTCGAAGGTGTTGTCTTCTTCTTCTTCGGCGCGGTTCCGGTCGAGGGAGCTATCTTCTCCGGCGCAGCTGTCTTCTTCTTCTCCGGCGCAGCTGTTCGTCCCTTTCCCCCACACACACAGTTCGGGCGCCGCAAGCGTTAGGAATTCTCTGCGTTCGGTTTTGTTTGGGTTGTGGTTGGATGGCACTGTTATGAACGTCTATTGCAGTGACGAGAGGAAAATTGTGAGGGTTGATGCAAAGAGAGCGTTGGTCGGAGCAGGTGCTCGAATTCTGTTTTATCTGACGCTTTTGTATAATGTGCATCGTAACAAGATTGAAGCTGAGTTCCGGTGGTGGGATCAAATTGATGAGTTTTTATTGCTCCGCACAGTCTCGTTCCCCAAAGATGTTCCTCACTTGAAGAAGCTTGGTGTGGGTGGTGTGATTACTCTGAATGAACCTTATGAAACTTTGGTGTCGTCATCATTATATCATCCATACAGGGCAACGGTTGTCAAGGCATTTTCGCGTGGAGCCCACAAGTTGGCGGTGGTGCTAGTTGCCTTCTGTTGTGTTGCTAATATCAGCAGCTTGAAAATTCTTGGGGTCCTTGGAGGAATGATTGAAGGACGTTATGTTGTGGCATAA 2280 0.4684 MMLRKTLETPLGEEESQRENLFHTRCHIADKVQPSEVIQPSEEMNLLKDQVLAKVFNLLISRNEASNFYTKSCFFDTFEGLSLVQLFAILSAHFSFWKVKSEAFAELRRDHALRQRELQRYKNENKRLDEDELSWEVILSEKVGEECIIPGEKQGKFCGSLDVFRLGEKPLAWARIERERDSRERGRGARGEPAKPRFILHDLPQPLSPFSIVNLEVSKAHTLSLHLVYALPDEPYLLPPFSRALKQRNPRAPFFTKPLVPLSSLNQPFPLSSLSCLRRVPAAVCLLRPSLAAVSSPLCLLQVATLPALFYNCDAPVAYVPAPCCNCDAVHSAAVAVVPPSVTFCCLRRRASVRALTIVLVEAVSLLVEFYLASYRNLTGTVYNVTTSDVQATLWVQTPDLREQYIGIANVQATSSDWVQMQGNFLLNGSQSKVIVYLEGPPPGVDILVNTFVLSTANVVSVNLFPIAANMFRTSNPFLADFRFSIFLDSQDSNKVFPPLLNLLYAMKIEELEDSECSRDEEEKYALQQFWDIRALSLGRSRFSSPARFPPSKVLSSSSSARFRSRELSSPAQLSSSSPAQLFVPFPHTHSSGAASVRNSLRSVLFGLWLDGTVMNVYCSDERKIVRVDAKRALVGAGARILFYLTLLYNVHRNKIEAEFRWWDQIDEFLLLRTVSFPKDVPHLKKLGVGGVITLNEPYETLVSSSLYHPYRATVVKAFSRGAHKLAVVLVAFCCVANISSLKILGVLGGMIEGRYVVA. 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02317 759 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 622 713 - -
Seca12g02317 759 Gene3D - 372 457 - -
Seca12g02317 759 SUPERFAMILY Galactose-binding domain-like 383 458 IPR008979 -
Seca12g02317 759 Coils Coil 104 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02317 Seca-Chr12 32041795 32063410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02317 625 711 Protein tyrosine phosphatase (PTP) family AT2G35680 68.966 5.83e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02317 - - gmx:100817410 160.999