Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02307 ATGCTGGTGAGTCTCTGCGACGCGGCAACGGAGACGAAGCAGAAGAAGAGTACTTACATAGTCCATGTGGCCAAATCTGAAATGCCAGAGAGCTTCGAGCACCACACGGCGTGGTACGAGTCGTCCCTACAATCCATATCTGACTCAGCCGAAATGCTCTACACCTACGACAACGCGATCCACGGATTCTCCACCAGATTAACAGCGGAAGAAGCTCGTTTGCTTGAGAGCCAAACGGGGATCCTAGCGGTGTTGCCTGAGATGAGGTACGAGCTTCACACAACTAGGACCCCTCTGTTCCTTGGCCTCGACAAGAGCGCAGACATGTTCCCCGAATCAAGCTCAGGGAGCGAGGTTATCGTTGGGGTTCTGGACACTGGTGTTTGGCCTGAAAGCAAGAGCTTCGACGACACTGGATTTGGACCCATCCCTAGCAGCTGGAAGGGCGAGTGTGAAACGGGTACCAATTTCACAGCATCAAACTGCAACAAGAAGTTGATTGGAGCAAGAAGTATCGAGTCTAAATCTCCGCGTGATGACGATGGCCACGGCACCCACACGGCGAGCACAGCCGCAGGTTCGGTGGTTTCAGGGGCGAGTCTATTCGGTTACGCTCCGGGGACGGCGCGTGGGATGGCCACGCGCGCCAGAGTCGCTGCGTACAAGGTTTGCTGGAAGGGAGGCTGTTTCAGCTCCGACATTTTGGCCGCGATTGATAAAGCCATTGAGGATAGCGTTAATGTCCTTTCTCTTTCCCTCGGTGGTGGAATGGCCGATTATTACAGAGACAGTGTTGCCATTGGAGCTTTTGCAGCAATGGAGAAAGGGATACTTGTCTCTTGCTCTGCTGGGAACGCGGGTCCAAGTTCCTACAGTCTCTCCAATGTGGCGCCATGGATAACCACCGTGGGCGCTGGCACACTGGATCGTGACTTCCCGGCGTACGTTAGCCTCGGAAATGGACTTAACTATTCTGGCGTGTCGCTCTATCGAGGCAACGCTTTGCCGGATTCTCCCTTGCCGTTTATATACGCAGGGAATGCCAGCAACGCTACGAATGGTAACTTGTGCATGATGGGAACCTTGTCGCCGGAGAAAGTCGCCGGGAAGATCGTGCTGTGTGACCGTGGATCGGTGGTGAAATCAGCCGGAGCGTTGGGCATGGTGTTGAGTAACACCGCCGCTAACGGTGAAGAATTAGTGGCTGACTCTCATCTTTTACCGGCGTCGGCGGTGGGTGAAAAGGCCGGGGATGCTATCAAGAAGTACTTGTTTTCCGATCCTAAACCAACGGTGAGGATTATGTTCGAGGGAACGAAGGTGGGGATTCAGCCATCACCGGTAGTTGCGGCGTTTAGCTCCCGGGGCCCTAATTCCATCACGCCGCAGATCCTGAAGCCTGATCTGATCGCGCCAGGTGTCAACATCTTAGCGGGATGGTCAAAGAAAGTGGGCCCCACTGGGATGTCAGTAGATGAAAGGCGCGTGGATTTTAATATCATCTCAGGCACGTCTATGTCCTGCCCTCACGTGAGTGGTCTAGCCGCTTTGATCAAGTCGGCTCACCCGGACTGGAGCCCAGCCGCGGTTCGATCGGCTCTCATGACCACGGCTTATACGGCTTACAAGAACGGTGGAAAATTGCAGTCCACGCCGTTCGATCATGGTGCTGGACACGTGGATCCCGTTGCTGCCCTTAATCCTGGACTCGTGTATGATCTGACGGCAGATGATTATCTTGGTTTCCTTTGCGCGCTAAACTACACAGCCTCTGAGATCACGAGCGTGGCTAGGAGAAAATTCCAGTGTGACGCAAGCAAAAAATACAGTGTGACCGACCTTAATTACCCTTCGTTTGCGGTGGTCTATGAATCCGGATCCAATGTAGTTAAACACACGCGGACTCTCACTAACGTGGGACCCGCAGGAACCTACAAGGCTTCTGTGACGTCAGATATTCCATCTGTGAAAATCTCGGTTGAGCCGCAAGTGTTGAGTTTCAAGGAAAATGAGAAAAAATCTTTCACGGTCACGTTTACGTCCTCCGGTTCGACCCCGCAGAGGGTGAGTGGTTTTGGAAGGTTAGAATGGTCTGATGGGAAGCACGTGGTTGGAACCCCGATCTCGATTAGCTGGGAGTGA 2142 0.5341 MLVSLCDAATETKQKKSTYIVHVAKSEMPESFEHHTAWYESSLQSISDSAEMLYTYDNAIHGFSTRLTAEEARLLESQTGILAVLPEMRYELHTTRTPLFLGLDKSADMFPESSSGSEVIVGVLDTGVWPESKSFDDTGFGPIPSSWKGECETGTNFTASNCNKKLIGARSIESKSPRDDDGHGTHTASTAAGSVVSGASLFGYAPGTARGMATRARVAAYKVCWKGGCFSSDILAAIDKAIEDSVNVLSLSLGGGMADYYRDSVAIGAFAAMEKGILVSCSAGNAGPSSYSLSNVAPWITTVGAGTLDRDFPAYVSLGNGLNYSGVSLYRGNALPDSPLPFIYAGNASNATNGNLCMMGTLSPEKVAGKIVLCDRGSVVKSAGALGMVLSNTAANGEELVADSHLLPASAVGEKAGDAIKKYLFSDPKPTVRIMFEGTKVGIQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKKVGPTGMSVDERRVDFNIISGTSMSCPHVSGLAALIKSAHPDWSPAAVRSALMTTAYTAYKNGGKLQSTPFDHGAGHVDPVAALNPGLVYDLTADDYLGFLCALNYTASEITSVARRKFQCDASKKYSVTDLNYPSFAVVYESGSNVVKHTRTLTNVGPAGTYKASVTSDIPSVKISVEPQVLSFKENEKKSFTVTFTSSGSTPQRVSGFGRLEWSDGKHVVGTPISISWE. 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02307 713 Gene3D Peptidase S8/S53 domain 119 579 IPR036852 GO:0004252|GO:0006508
Seca12g02307 713 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 709 IPR045051 -
Seca12g02307 713 Pfam Peptidase inhibitor I9 18 93 IPR010259 -
Seca12g02307 713 FunFam Subtilisin-like protease SBT1.5 118 319 - -
Seca12g02307 713 CDD PA_subtilisin_like 315 434 - -
Seca12g02307 713 Gene3D - 309 442 - -
Seca12g02307 713 FunFam Subtilisin-like protease SBT1.9 7 93 - -
Seca12g02307 713 SUPERFAMILY Subtilisin-like 92 570 IPR036852 GO:0004252|GO:0006508
Seca12g02307 713 Pfam Subtilase family 116 543 IPR000209 GO:0006508|GO:0008236
Seca12g02307 713 Pfam PA domain 357 420 IPR003137 -
Seca12g02307 713 ProSitePatterns Serine proteases, subtilase family, serine active site. 503 513 IPR023828 -
Seca12g02307 713 Gene3D - 583 712 - -
Seca12g02307 713 Pfam Fibronectin type-III domain 613 710 IPR041469 -
Seca12g02307 713 CDD Peptidases_S8_3 90 539 IPR034197 -
Seca12g02307 713 ProSiteProfiles Serine proteases, subtilase domain profile. 89 566 - -
Seca12g02307 713 FunFam subtilisin-like protease SBT1.5 309 441 - -
Seca12g02307 713 PRINTS Subtilisin serine protease family (S8) signature 502 518 IPR015500 -
Seca12g02307 713 PRINTS Subtilisin serine protease family (S8) signature 116 135 IPR015500 -
Seca12g02307 713 PRINTS Subtilisin serine protease family (S8) signature 179 192 IPR015500 -
Seca12g02307 713 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 93 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02307 Seca-Chr12 31842091 31844322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02307 1 712 Subtilisin-like Serine Gene Family AT5G67360 71.237 0.0 1070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02307 - - gmx:100815413 1193.33