Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02296 ATGGGTCGGCTTACTCTCATATTTGTTTGGTCACTCTCATTAACACTCTGTTTTAATCCTTATTCTACTTTTGCCCAACTTAGTCCAAACCACTATGCTAACATCTGCCCCAATCTTCAAAGCATCGTTAGAGGTGCAGTTCAAAGGAAGTTCCAACAAACATTTGTTACAGTTCCTGCCACGCTTCGTCTCTTCTTTCACGATTGCTTTGTCCAGATTATATATTTATTACAGGGCTGTGATGCTTCAGTTATGGTAGCATCCACAGGAAATAACCAAGCAGAGAAGGATCACCCTGACAACTTGTCATTGGCTGGTGATGGATTTGACACAGTGATCAAAGCAAAAGCAGCTGTAGATGCTGTCCCACAATGCAGAAACAAAGTCTCGTGTGCTGATATTCTTGCCCTGGCTACACGGGATGTTATTGTACTGGCTGGTGGACCATCCTATACGGTTGAATTGGGAAGATTTGATGGGCTAGTCTCAAGAGCTTCTGATGTGAATGGAAGGCTCCCTCAGCCAAACTTCAATTTGAACCAGCTGAATGCAATGTTTGCGTCGCACGGACTCACCCAAACAGACATGATTGCACTCTCAGGAGCACACACCCTTGGATTCTCCCACTGCAACAGGTTCTCCAATAGAATATTCAACTTCAACAACCAAAGCCCAGTGGACCCGACATTGAACAAGCAATACGCAGCCCAATTGCAACAAATGTGCCCAAGGAATGTGGATCCAAGGATAGCCATCAACATGGACCCAACCACTCCCCGAACATTTGACAATGTGTACTATCAGAACCTTCAGCAAGGAAAGGGGCTTTTCACCTCCGATCAAATCCTCTTTACCGACGCAAGATCCAGAGCTACGGTTAATTCCTTTGCTTCTAGCAGCAACGTCTTCAACGCCAACTTCGTTGCTGCTATTACCAAACTGGGTCGCGTTGGGGTCAAGACTGCGAGCAATGGGAAAATTCGTACCGATTGTTCCGTGCTTTAA 1005 0.4557 MGRLTLIFVWSLSLTLCFNPYSTFAQLSPNHYANICPNLQSIVRGAVQRKFQQTFVTVPATLRLFFHDCFVQIIYLLQGCDASVMVASTGNNQAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQCRNKVSCADILALATRDVIVLAGGPSYTVELGRFDGLVSRASDVNGRLPQPNFNLNQLNAMFASHGLTQTDMIALSGAHTLGFSHCNRFSNRIFNFNNQSPVDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRTFDNVYYQNLQQGKGLFTSDQILFTDARSRATVNSFASSSNVFNANFVAAITKLGRVGVKTASNGKIRTDCSVL. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02296 334 FunFam Peroxidase 173 314 - -
Seca12g02296 334 FunFam Peroxidase 30 183 - -
Seca12g02296 334 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Haem peroxidase superfamily signature 147 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Seca12g02296 334 SUPERFAMILY Heme-dependent peroxidases 26 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 Gene3D Peroxidase, domain 2 173 314 - -
Seca12g02296 334 ProSiteProfiles Plant heme peroxidase family profile. 26 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Seca12g02296 334 Gene3D - 30 333 - -
Seca12g02296 334 Pfam Peroxidase 44 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PANTHER - 9 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 CDD secretory_peroxidase 26 333 IPR033905 GO:0004601|GO:0042744
Seca12g02296 334 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Plant peroxidase signature 128 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Plant peroxidase signature 147 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g02296 334 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02296 Seca-Chr12 31517635 31520264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02296 1 331 Peroxidase AT5G67400 67.069 5.70e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02296 K00430 - gmx:100817540 536.569