Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02278 ATGGAGGGTTCAGATGTCACCTCTCTCCTTTTCTGTGATGAAGATCCCACCCTTTTGTTGCACAGTGATGAGGATGAAAATATCAACATCATTGTTCACTCATCGAATAATTCATGTCCTATTTCTGAGCAGGATGAGAAGGAGCAAATTGGGAATTTGTTTAGGCTTGAAGTAGAGTTAGCATCCTCCAATGGTTGCTCTGTCCATGTGAAGAACACACGTCTCATTGGCATTGACCACATCTTAAAAATTCGGGAAAGACTTGCATTGAAGCTGCACACAGCTTATTTGTCAATTATGTATTTAGATTGGTATCTTTCAAAGCGAGGTGTCCATGAACACAAGTCTTTCCCTATTCATCTATTATCAGTGGCATGTTTGTCTCTAGCAGCAAAGATGGAAGAGCATGAACCACCACTTCTATCCCGATATGTAACAGAGGAAGGACTAGGTTTTGTTAACAAACAATCCATTGAGAAGATGGAGTTAGATGTTTTCTGTACCTTGGAATGGAAATTGAGAGCGGTCACTCCTTTTGATTATCTGCATTACTTGGTTGGCTTGTTATGTCCTGAATCTCTACCAGAACCATTAGTCTCAAAGGCTAAGGAACATGTTATGGCTATTGTAAAAGATGTTAATTTGATGGGTATACGACCCTCTGTTATTGCCTTGGCTGCCACATTAATGACAACTTTTGATTCTGCGTTAACAAGAGAGATCATGGATCATCAGATAGGTGAAATTTCTTCGTGGGGAAATTTACATAGTGGACATGTATTTTCCTGTTATCATCTCATGCAGGAAAAGAACAAAGAGAGGGAAAGGTTAAACACTCCTACCTCAACTTTGACAGCTGAATGGAGCTACACATCTGCTCTTGACATTTCCTCCATCACTTCTTCTACAACTATGAGAAGACTTACTTTTGGCAACGGAGAAAATGGTCAGAGGAAAAGGCCACATCAGCCTTAG 975 0.4021 MEGSDVTSLLFCDEDPTLLLHSDEDENINIIVHSSNNSCPISEQDEKEQIGNLFRLEVELASSNGCSVHVKNTRLIGIDHILKIRERLALKLHTAYLSIMYLDWYLSKRGVHEHKSFPIHLLSVACLSLAAKMEEHEPPLLSRYVTEEGLGFVNKQSIEKMELDVFCTLEWKLRAVTPFDYLHYLVGLLCPESLPEPLVSKAKEHVMAIVKDVNLMGIRPSVIALAATLMTTFDSALTREIMDHQIGEISSWGNLHSGHVFSCYHLMQEKNKERERLNTPTSTLTAEWSYTSALDISSITSSTTMRRLTFGNGENGQRKRPHQP. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02278 324 Gene3D - 175 249 - -
Seca12g02278 324 CDD CYCLIN_AtCycD-like_rpt2 176 267 - -
Seca12g02278 324 PANTHER CYCLINS 51 271 IPR039361 -
Seca12g02278 324 SUPERFAMILY Cyclin-like 47 173 IPR036915 -
Seca12g02278 324 Gene3D - 72 174 - -
Seca12g02278 324 Pfam Cyclin, N-terminal domain 72 174 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02278 Seca-Chr12 31074807 31076164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02278 2 252 Core Cell Cycle Gene Families AT4G37630 33.585 6.00e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02278 K18811 - gmx:100808000 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02278 12 31074807 31076164 Seca12g02278 12 31074807 31076164 ECH