Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02274 ATGGCCGGCGAGAGAGTTGTAGAGAAGCCTCCCCTTTGCGGTGCAAGGAAGACAATGAGGAAGGGGCGGCTCTCCGTTCAGCAGCGCCCAGCTCCGCCGCTCCTCGCGTCCTCCAGCAGCGGCTCCATTCGGCGTCCAGAAGCTCCGTTCGACATCAAGCTCCTCCGTTCAGCATCTTCTCCAGTTCGCACGTCGCCGCTTTCCGTCGCCCTGTTCTGTTCTGCTCAGCCGCTGCTCCATAGCCTCCACTGCATCCAGCCCGATCTGCTCCTTAGCGAAATCCATGTGAAATGTGAATTCTGGGTATTCATAGAGATATGTTTGAAATCTTGTGATGAGAAGTCATGGTTGCGCGCATTCCTCCGCCCGTGTGCGTCACCGCTGCGTCTAGCCACATCGTCGTCGCTGCAGTCCACCGGTAAGGGAGCGGGAGAGGAGCACACACGTGAAGATGGTTTGAGGAACGCACGACAGCGCTGCCAGAGGGGAGAGGCAGCTTGTACAGTGGCGATGGTATGGCTGGTGGCAGCATCGATCTGGCTGAAGAGGGAACAAGCTGTGGCGAATATTAATAATGATTTGGTAAAGGTTCGCCAAGCTACAGCACAAGTTCTAGCTTCTCAGAAGCAGTTAGAAAGCAAGTACAAAGCCGTCCAAAAAGCTTCTGATGATTGGTATCGAAGGGCACAACTTGCTCTTCATAAGGGGGATGAGAAGAGTGAATTGGGCTGGGAAATTGTTCAAGAAGAATCTATTAAGAATCCTGGACGACATAGCAGATTGTGGGATCCGAAGGAAGTTTGTGATGTATTGACAAATGATAGGGGAACTGGTGAAGTTAAAGCCATATTTTTAGATATGACTCAAATTACTTACATAAATTTAATGTTGAATTGA 897 0.5084 MAGERVVEKPPLCGARKTMRKGRLSVQQRPAPPLLASSSSGSIRRPEAPFDIKLLRSASSPVRTSPLSVALFCSAQPLLHSLHCIQPDLLLSEIHVKCEFWVFIEICLKSCDEKSWLRAFLRPCASPLRLATSSSLQSTGKGAGEEHTREDGLRNARQRCQRGEAACTVAMVWLVAASIWLKREQAVANINNDLVKVRQATAQVLASQKQLESKYKAVQKASDDWYRRAQLALHKGDEKSELGWEIVQEESIKNPGRHSRLWDPKEVCDVLTNDRGTGEVKAIFLDMTQITYINLMLN. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02274 298 MobiDBLite consensus disorder prediction 18 43 - -
Seca12g02274 298 PANTHER MEMBRANE-ASSOCIATED PROTEIN VIPP1, CHLOROPLASTIC 184 239 IPR007157 -
Seca12g02274 298 Pfam PspA/IM30 family 184 239 IPR007157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02274 Seca-Chr12 30894511 30904823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02274 243 292 WRKY Transcription Factor Family AT4G12020 44.000 2.22e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02274 K03969 - gmx:100794403 98.9821