Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02258 ATGGCAGCTTTCTCCTGCAAATCCCTTCCAAACCCTCCCAAGTTTCCTTCTCATCGATTCAATTACCAGTTCCACCCACAACAAGTAAATTTTATATCTTGGCCCTCAGAGTCAAAGTCAAATAATCCCTTATCCAAGAGGGGGATCTCAATCTCAACCTCCAAATGCTGCAACGTATTCAGCGAAGAGTTGAACGGGAATGTAGTGGAAGACGAGACTCACAGCTACATGGAGGATAAGCAATTCGTGCGTTGGTTTCGTGAGACATGGCCCTACTTGTGGGCTCATCGTGGTGGCACCTTTGTTGTCATCATTTCCGGTGAAATTGTCGCTAGTCCTTTCTTGGATCCCATTCTCAAGGATATAGCATTCCTTCATCACCTGGGAATTCGGTTTGTTCTTGTTCCAGGGACCCATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGCCAGCCTAAGTATGTTGGTCCATATAGGATAACTGATGATGAATCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGACTGATGATGGAAGCAAAGCTTTCTCCTGGACCCTCTATTTGTAATATTCGTCGACATGGTGATAATAGCCGTTGGCATGAAGTTGGTGTTAGTGTTGCCAGTGGTAACTTTCTTGCAGCTAAGAGAAGAGGGGTTGTCAAAGGAATTGATTATGGGTCAACTGGGGAAGTTAAAAAAGTAGATGTTTCTCGCATGCGTGAGAGGCTTGATGGTCGTTGTATAGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGCTTATATGCATTATAGATGGTCCAATACTTGATGAGAGTGGACACCTTATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGTTGAGCAAAGTGAAACAGCTGCTAACTATGTCAAAGCTGTTGATGAAGAAGGTTTCAAATCTCTTGGGTTTAACAATTTTAATGGGACAGTCCATTCTCCAGAGAATGGAAAACCATATTCACAATGGCATAATGCAACCTTTCATAATGGCGTTGGTTTTGACAATGGGAATGGAATGTGGTCCGGTGAGCAAGGTTTTGCTATTGGAGGTCAGGAGTGGCTAAGCCGAATGAATGGCTACCTGTCAGAACTTGCTGCTGCTGCCTTTGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTCTATTGTTGGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAGGTAACAGATATGTCTGGAATAAAGCAACTTATCCAGCCTTTGGAGGAGTCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGCTTCAATCGTTGAGTTCTTTCATTGTTGTGGAAAGAGAAGGTCAAATCATTGCTTGTGCTGCACTTTTTCCTTTCTTTGAGGAGAACTGTGGAGAGGTTGCTGCAATTGCAGTATCTCCCGATTGTCGAGGCCAAGGACAGGGAGACAAATTGCTTGATTATATAGAAAAGAAGGCAGCATCGCTTGGGTTCCATATGCTTTTCTTGCTTACAACTCGTACAGCGGATTGGTTTGTGAGGCGTGGATTTAAAGAATGTTCAATTGATTCTATACCTGAGAAGAAGAGGAAAACGATTAATCTGTCCCGCAAGTCTAAGTATTATATGAAGAAGCTTCTACCTAATAAGAGTGGGATTACTGTTCATAGGAAACATACTTCCTGCTAG 1833 0.4343 MAAFSCKSLPNPPKFPSHRFNYQFHPQQVNFISWPSESKSNNPLSKRGISISTSKCCNVFSEELNGNVVEDETHSYMEDKQFVRWFRETWPYLWAHRGGTFVVIISGEIVASPFLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGSQPKYVGPYRITDDESLAAAMEAAGRIRLMMEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVKGIDYGSTGEVKKVDVSRMRERLDGRCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGHLIRFLPLQEADMLIRKRVEQSETAANYVKAVDEEGFKSLGFNNFNGTVHSPENGKPYSQWHNATFHNGVGFDNGNGMWSGEQGFAIGGQEWLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDMSGIKQLIQPLEESGILVKRTDEELLQSLSSFIVVEREGQIIACAALFPFFEENCGEVAAIAVSPDCRGQGQGDKLLDYIEKKAASLGFHMLFLLTTRTADWFVRRGFKECSIDSIPEKKRKTINLSRKSKYYMKKLLPNKSGITVHRKHTSC. 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02258 610 PANTHER AMINO-ACID ACETYLTRANSFERASE 54 602 IPR010167 GO:0004042|GO:0005737|GO:0006526
Seca12g02258 610 Gene3D - 80 447 IPR036393 -
Seca12g02258 610 SUPERFAMILY Carbamate kinase-like 77 317 IPR036393 -
Seca12g02258 610 Hamap Amino-acid acetyltransferase [argA]. 77 594 IPR010167 GO:0004042|GO:0005737|GO:0006526
Seca12g02258 610 Pfam Acetyltransferase (GNAT) family 487 553 IPR000182 GO:0016747
Seca12g02258 610 SUPERFAMILY Carbamate kinase-like 396 444 IPR036393 -
Seca12g02258 610 NCBIfam amino-acid N-acetyltransferase 403 594 IPR010167 GO:0004042|GO:0005737|GO:0006526
Seca12g02258 610 Gene3D - 448 594 - -
Seca12g02258 610 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 448 596 IPR000182 GO:0016747
Seca12g02258 610 CDD AAK_NAGS-ABP 81 442 IPR033719 -
Seca12g02258 610 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 451 598 IPR016181 -
Seca12g02258 610 CDD NAT_SF 489 551 - -
Seca12g02258 610 Pfam Amino acid kinase family 101 313 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02258 Seca-Chr12 30673496 30680734 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca12g02258 AA_kinase 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02258 K14682 - gmx:100800925 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g02258 12 30673496 30680734 Seca12g02258 12 30673496 30680734 PCT