Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02218 ATGGATAATCATATAACAAGGCTTAATTGGGCTATTCTTAATACTTTGTGTAGAGATAAGAACAACATAGTGTTTCTTGTTAGTGCTAAAAGCCGAAAGTACCTCTCTGAATGGTTTTCTCCTTGTGAGAATCTGGGAGTTGCAGCTGAGCATGGTTACTTTATAAGCTGGAAACAAATTGCAGAGCCTGTTATGAAACTTTATACTGAAACAACTGATGGATCCACCATTGAAGATAAGCAGACCAAACTTGTTTGGTACTATGAGGATGCAGATCCTGATTTTGGATCATGCCAAGGTAAGGAATTTCTTGATCATCTTGAGAGTGTGCTGGCAAATGAACCTATAACAGTCAAAAGTGGCCAGAATAATGTAGAGGTCAAACTACAAGTGTGTATAACATTCTAG 408 0.3775 MDNHITRLNWAILNTLCRDKNNIVFLVSAKSRKYLSEWFSPCENLGVAAEHGYFISWKQIAEPVMKLYTETTDGSTIEDKQTKLVWYYEDADPDFGSCQGKEFLDHLESVLANEPITVKSGQNNVEVKLQVCITF. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02218 135 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 11 129 IPR001830 GO:0003824|GO:0005992
Seca12g02218 135 FunFam Trehalose-6-phosphate synthase 2 53 130 - -
Seca12g02218 135 Pfam Trehalose-phosphatase 11 130 IPR003337 GO:0003824|GO:0005992
Seca12g02218 135 SUPERFAMILY HAD-like 2 129 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02218 Seca-Chr12 29658356 29658908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02218 12 130 Trehalose Biosynthesis Gene Families AT1G68020 73.529 1.58e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02218 K16055 - gmx:100818822 210.69