Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02209 ATGGAAGTGCCACTTGGCACTATAGAGGAGCACAATGGTAGTGCCTCACCTGTTGAAGAGTTTCTACACATGTATCCGAGGATGACTATAAGTGAACTGCATGCCACTGAGGAGGTTTGGATTTCTTTTTTTGTCACTATTCTCGGCGATAGTCAATGGTGGTACTGTGCGTGCAAGTGCAATAGGGCGGTAACAGTTGACGAGGACAATTACTACTGTTCGTTTTGCACGGCGAATGTGACTGAAATTACTCAAAGGTACAAGTTGAAAGTCGAGGTGTTCGATGGAGAAGACATTATTGTATTTGTCATGTTTGACAGTGATGCTGAGTTTGTTACTGGCAACAAGTTTATTGTTCCCTTCCCAAGTCTGGACGACATATCTGAGGAAAACGCACAGGGTAATCGTAGTGCACCCGACTTAGATGTAGTTGATGTTCCAGGTGAGGCGCCTTTCTATGTGGATGATTACTTGTCTGACCAGGCTGGCTGCTGCGTTGGTTCTGACGGTGTAGGTGTGGGTGAGGCAAGCGGGAGCGGCTTCGGTGAAGGTGGCAAAAAAGAGAAAGATATAGATGCCTACTGA 585 0.4632 MEVPLGTIEEHNGSASPVEEFLHMYPRMTISELHATEEVWISFFVTILGDSQWWYCACKCNRAVTVDEDNYYCSFCTANVTEITQRYKLKVEVFDGEDIIVFVMFDSDAEFVTGNKFIVPFPSLDDISEENAQGNRSAPDLDVVDVPGEAPFYVDDYLSDQAGCCVGSDGVGVGEASGSGFGEGGKKEKDIDAY. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02209 194 SUPERFAMILY Nucleic acid-binding proteins 25 115 IPR012340 -
Seca12g02209 194 Gene3D - 19 133 IPR012340 -
Seca12g02209 194 Pfam Replication factor-A C terminal domain 44 114 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02209 Seca-Chr12 29444745 29445938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02209 36 135 Core DNA Replication Machinery Family AT5G08020 31.373 8.92e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02209 - K04988 lja:Lj1g3v3385890.1 100.523