Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g02159 | ATGGGTTGTTTACACTCCAAAACCGCTCATCTTCACTCTCCTGAAGACCCTCCTACTGCATTACCCGACTCTAAGAAACCCGATCCAGGTGATGGTGGGGATGATGTCGATCAAGAGTGTCAGGTTCCAGCATTCAAAGAGTATGGTCTGAATGAACTGCGAAGGGCCACAAATGAGTTCAGCACAGATTACATTGTTTCTGAAAGTGGTGAGAAAGCTCCCAATGTGGTCTACAGAGGAAAGCTGGAGAACAATCGGTTAGTTGCTGTCAAACGGTTCTCCAAATTGTCATGGCCTGATGCTCAACAGTTTATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAAAGACTGGTGAATCTAATTGGTTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTAGCTGAGTACATGCCAAATGATACTTTGTCCAAGCATCTCTTTCATTGGGACAAGCAACCATTACCATGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCCCAGGCACTAGATCATTGTAGCATGGAAAACCGGAAAATATATCATGATCTGAATGCATATAGAATTCTTTTTGATGAGGATGGTGATCCCCGTTTATCAAGTTTCGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACTAATTTAGCTTACACTCCACCTGAATTTTTGCGAACAGGCAGGATAATCCCAGAGAGTGTGATCTACAGTTATGGAACTGTTCTTCTGGATCTTTTGAGTGGCAAGCATATTCCTCCAAGCCATGCTTTGGACCTAATTAGAGGGAAAAATGCATTGTTGTTGATGGATTCGTCCCTAGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGAACGACCTGATATTAAGTTTCTTCTTACTGCAGTTGCACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTAATGGGCCTTACTAAAACCACGGCAGTGCTACCAACCATGCTTTCTCCTCTGGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGGTATGTCAAATCACCATGTTTTTTCCTAAAATGCTGGTTTAA | 1167 | 0.4276 | MGCLHSKTAHLHSPEDPPTALPDSKKPDPGDGGDDVDQECQVPAFKEYGLNELRRATNEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVAPLQKQKEVASHVLMGLTKTTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENEVCQITMFFPKMLV. | 389 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g02159 | 388 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 35 | 376 | IPR045845 | GO:0004672|GO:0009742 | |
Seca12g02159 | 388 | ProSiteProfiles | Protein kinase domain profile. | 63 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g02159 | 388 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 314 | IPR011009 | - | |
Seca12g02159 | 388 | MobiDBLite | consensus disorder prediction | 19 | 33 | - | - | |
Seca12g02159 | 388 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Seca12g02159 | 388 | Gene3D | Transferase(Phosphotransferase) domain 1 | 140 | 332 | - | - | |
Seca12g02159 | 388 | FunFam | probable serine/threonine-protein kinase At5g41260 | 140 | 331 | - | - | |
Seca12g02159 | 388 | Pfam | Protein tyrosine and serine/threonine kinase | 76 | 311 | IPR001245 | GO:0004672|GO:0006468 | |
Seca12g02159 | 388 | FunFam | probable serine/threonine-protein kinase At4g35230 | 35 | 138 | - | - | |
Seca12g02159 | 388 | Gene3D | Phosphorylase Kinase; domain 1 | 34 | 138 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g02159 | Seca-Chr12 | 27730506 | 27736497 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g02159 | 14 | 317 | Glycoside Hydrolase | AT3G07070 | 33.735 | 2.46e-42 | 151 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Seca12g02159 | PK_Tyr_Ser-Thr | 7.4e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g02159 | K14500 | - | gmx:100793576 | 732.25 |