Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02135 ATGAATGCAAGGTTGGGGGATTTTGGGCTTGCAAGGTTGCATCACCAAGAACATGTGGCTGAAACAACAAGAGTAATAGAGACTCTGGGGTACATAGCACCAGAACTAGTCAGAGTTGGAAGACCATCAACTACAAAGGATGTGTATAGTTTCAGAATATTGGTTTTAGAAGTTGTATGTGGGAGAAGACCTATTGTAGTACATATGCCACCATTGGTTAACTGGGTATTTTCCCTTATGGAGAAAGGGGAATTGAGTTGTGCTATTGATGAGCTTTTGAAGACTCAAAGTGGGTATATCATTGAGGCAAGTGGTGAAAGTATTAGACTATTTAAGGGAATAAACTGCAAGAGTGCATCCATGCGGGTCTTATTGGAAAAATAA 384 0.401 MNARLGDFGLARLHHQEHVAETTRVIETLGYIAPELVRVGRPSTTKDVYSFRILVLEVVCGRRPIVVHMPPLVNWVFSLMEKGELSCAIDELLKTQSGYIIEASGESIRLFKGINCKSASMRVLLEK. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02135 127 SUPERFAMILY Protein kinase-like (PK-like) 2 91 IPR011009 -
Seca12g02135 127 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g02135 127 PANTHER - 1 94 - -
Seca12g02135 127 Pfam Protein kinase domain 3 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g02135 127 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02135 Seca-Chr12 27000346 27000729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02135 1 99 Receptor kinase-like Gene Family AT5G01540 51.515 1.99e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca12g02135 Pkinase 8.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02135 - - gmx:112998578 167.162