Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02131 ATGTCGGCACCAATCAACAATACTCCGGCGAAGGCGGGAACCCTAGGCATGGTGGTGGCTGCTAATCCGCCCAAGTCTCAACGCGGCCATAACAAGCCCAAGTGCAAGCAGTGCGGCAATGTTGCTCGCTCTAGGTGTCCCTATGAGCAATGCAAGAGTTGCTGCTCAAGAAATCAAAATCCATGCCATATTCATGTGTTAAAAGCTAATTCAACTTTTAATGACAAGACTCCATCTTCTGGTGCCGCCCCACATGATCAGCAATCCTCGGAACCACCTCAATCAATAAGTGCAGGCAGAGTGGCATCTCTTCGACAACTTTCCAATAGTTTTGCTCAGTTCAATAATTTGCACCTTTCACTTCGTTCAAAGAAGCCACTGACTAGAAAGGATGCTGCAGCTATCAACGAATGGAGATTTTCCAAGTTACAAGAATACAAGGAGCAAAATATTGAATTGGAAAATGAAGCTTTTGACCGATACATGCAAAATGTAGATTTACTAGAAGAAGTATTATCTGTGAAATCTTCGGATGATAATATTTCCTCTGTGTCGGAGTGCAATCCTACTCCAACAGAGAACAATCCTACATCAACAGAGAACAATGAAGTAATGACCCCGGGGTTAAAATTGCAGCTAAGGTCAAACTCGATGAGAAGTGATCATGTGAGAATGAGAATACAACACATTGTAGATGAGGGATTAAAGAAGCTTCAGAAGTGTGCTGCAGATAGTGACATCAATGAATCAATTGATGAAGCTGATAAAGCTTCAGAAAGGGGAAAGAGGACTGAAAGGTTATCAGCTATAAGTGATCTTATAGATAAAATTAATAAAGCCCGAAATGAGGATGATTTGAAGTCGTGCTTGGAGATGAAGTTCCAGCTTTTCAATTCAGAGGAAGGCACTGACATGATGGAACAAGACAATGAAATGCCTAAGGCTCAAACTACTGAAAATGATGTGGCACCAGCAAAAGAATTGGATTATTCTTTACCAAAACTGGTTGTGACCACTGAAATTGATCAAGAAACTCTCAACATCATAGACAAGCACTTTTCTTCTTCTCTTGAGTATGTAGAGCAGTTATGA 1092 0.4112 MSAPINNTPAKAGTLGMVVAANPPKSQRGHNKPKCKQCGNVARSRCPYEQCKSCCSRNQNPCHIHVLKANSTFNDKTPSSGAAPHDQQSSEPPQSISAGRVASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFSKLQEYKEQNIELENEAFDRYMQNVDLLEEVLSVKSSDDNISSVSECNPTPTENNPTSTENNEVMTPGLKLQLRSNSMRSDHVRMRIQHIVDEGLKKLQKCAADSDINESIDEADKASERGKRTERLSAISDLIDKINKARNEDDLKSCLEMKFQLFNSEEGTDMMEQDNEMPKAQTTENDVAPAKELDYSLPKLVVTTEIDQETLNIIDKHFSSSLEYVEQL. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02131 363 PANTHER ELECTRON CARRIER/IRON ION-BINDING PROTEIN 18 363 - -
Seca12g02131 363 MobiDBLite consensus disorder prediction 73 97 - -
Seca12g02131 363 Pfam Domain of unknown function (DUF702) 34 73 - -
Seca12g02131 363 MobiDBLite consensus disorder prediction 179 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02131 Seca-Chr12 26889344 26899997 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Seca12g02131 DUF702 0.00034 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02131 - - gmx:100816049 522.702