Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02052 ATGGAAGATTCAATGGGTGATAGAAGCGATTTGAATGATGAGAACAATGCACCAAAGGGACGAGAAGGAATGTCAAGTAGTAATGGTAGGAATGGTAACAATGTTGATGGTGAAAATGGTGGTGTTGAGTGTGAAGGTGAACACATGGATGAACATTCTGATGCAGAAGATGATGTTGATGAATATAGAATAGACAATAATCGGCTTATGGCATTTGAATTCTATAATAAGTATGCACTGAAAAAGGGATTTGCTGGTCGAAGATGGAATGTTCTAAAAAACAAAAGAGGAGAAGTTACCCAGCAAGAATTTGTGTGTTACAAGGAGGGATTTCGTGACAAGAAACACTTACAGAGGACTGGTCGAAAGCGAGAGCCGAGAGCAATGACAAGACTTGCAGGGAGAAATGTGGACAAGTTAAATGCAACACAAGAACTTGTTAGAAAATATTTGGTGACTTTGAAGGAAGATTCAGATGCAAAAAGTGCAGAGGATGGAAATGAAAGTGATGATGAATTAGTGAATGTTCGGGATCCTGTGCGTGTGAGGACTAAAGGGTGCGGATTGAGACAACAAGCATCAAACAGAAGAGGTGATAGGAGGTCTAATTGTTGCAGTGTTTGTCAACGTCCATGCCATAATAAGAAGACGTGCCCAAAACGAATACACCCACCTAATGGTCGCAGGACTATACAGAGAAATGACAATGATCATACAAACGTCCAAATGATGGATGTATAA 741 0.4008 MEDSMGDRSDLNDENNAPKGREGMSSSNGRNGNNVDGENGGVECEGEHMDEHSDAEDDVDEYRIDNNRLMAFEFYNKYALKKGFAGRRWNVLKNKRGEVTQQEFVCYKEGFRDKKHLQRTGRKREPRAMTRLAGRNVDKLNATQELVRKYLVTLKEDSDAKSAEDGNESDDELVNVRDPVRVRTKGCGLRQQASNRRGDRRSNCCSVCQRPCHNKKTCPKRIHPPNGRRTIQRNDNDHTNVQMMDV. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02052 246 MobiDBLite consensus disorder prediction 1 58 - -
Seca12g02052 246 Pfam FAR1 DNA-binding domain 73 132 IPR004330 -
Seca12g02052 246 MobiDBLite consensus disorder prediction 19 35 - -
Seca12g02052 246 MobiDBLite consensus disorder prediction 1 17 - -
Seca12g02052 246 MobiDBLite consensus disorder prediction 216 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02052 Seca-Chr12 25410825 25414290 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g02052 FAR1 5.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02052 - K17604 mtr:120580664 75.8701