Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02043 ATGGATATGACCTTTGATGCTAAGAGCCAAGATATAGAAAATAATTCAAAGGTCGCAGTTGCATGGATGTTAATGAATGAAGCTTTTGAGACAATAATCGACAAACACACAGGCATCAACGTGCTTCAAAGTATAGTTTACAGTTGTGGATCAAACTTAACCAGGATTAATTTTAGTCGTTTCTATACATTTGTCATGGAGAAAGATGATGAAATAATTTGTGCAGCTACTATAAGATTACATGGGAGAGGGATTGCAGAAATGCCTTTTATTGGCACGGATAATGAGTACAGAGGACAAGGAATTTGCCGGTTGTTAATGAGGGAAATTGAATCATTCCTATGTAGCCTCAAAGTCAAAAGCTTGATCATTCCATCCGTTCCAAAGACTTCTAGGATGTGGAAGTGCAAGTACGGCTTCAAGACTTTCGCCATAACAAGGAAGATAATCAAACTGGTATTTAGAATTGCCAGGAACCACAAGAAAGTCAAGCTAAGAAACCGTTGGCCAAGCCCAGGAGGAACCAACTAG 531 0.3898 MDMTFDAKSQDIENNSKVAVAWMLMNEAFETIIDKHTGINVLQSIVYSCGSNLTRINFSRFYTFVMEKDDEIICAATIRLHGRGIAEMPFIGTDNEYRGQGICRLLMREIESFLCSLKVKSLIIPSVPKTSRMWKCKYGFKTFAITRKIIKLVFRIARNHKKVKLRNRWPSPGGTN. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02043 176 Gene3D - 7 161 - -
Seca12g02043 176 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 159 IPR000182 GO:0016747
Seca12g02043 176 PANTHER PHD FINGER PROTEIN 12 7 143 IPR042163 GO:0003714|GO:0045892
Seca12g02043 176 CDD NAT_SF 64 124 - -
Seca12g02043 176 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 24 142 IPR016181 -
Seca12g02043 176 Pfam Acetyltransferase (GNAT) family 62 122 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02043 Seca-Chr12 25017681 25019188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02043 2 141 PHD Transcription Factor Family AT4G14920 48.571 2.33e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02043 - - lang:109331897 199.904