Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02042 ATGGAGACGAAACTTGTGGAATCAGATTTAAATATAACAATAAGAAGTCTTGTAGATCGTGGACGACGTGGAAGAGATCATAAGCGAGGTAGGCATGGAAAAGGAGGAGGGAATACAAGATGGAGTAAACAGGGTACACATAGTACACAGAGTCACCCTTCTCAGAAAAGGGAAGCAAGCAAAAAACAAAACAATGAAGATAATACTCTTGGAACAAGCTCGATAATAATGGGAAAAGATATATCATCACCACAAAGACAATTTACGAGCATGGAAATGTGTTCACCTTCACCTCCACATTCACTTGAACGAGTAAGGCCATGTAAAAAAACCATCATATCATGGTTGATAGATGGTAAGCTTATAAAGGAAAATGAACAAGTAAAATATTATTTTGAAGGGGAAACACCAGAAAGTAAAACTAGAATAGAAAAAGGAAAAGGAAGAATTACCATGGATGGAATTCTTTGTGACTGCTGCCAGAGGAAGTTTTCAGTGTTGGAATTTGAGAAGCATGTTGGAAGTTATCTTGGACAACCCTATAAATGTATTTACCTTCACGAAAGACACATGTCCCTCCACAACCTCCAAATTATTGCCTTGCAAGATCCTAGCGAACTAAAACGACAGTGTACATATTCATATGTATGCAACGAAAATGCCACAGATCAAAATGATGATGCATGTGCAATATGCGGAAATGGGGGAGACTTAGTATGA 720 0.3792 METKLVESDLNITIRSLVDRGRRGRDHKRGRHGKGGGNTRWSKQGTHSTQSHPSQKREASKKQNNEDNTLGTSSIIMGKDISSPQRQFTSMEMCSPSPPHSLERVRPCKKTIISWLIDGKLIKENEQVKYYFEGETPESKTRIEKGKGRITMDGILCDCCQRKFSVLEFEKHVGSYLGQPYKCIYLHERHMSLHNLQIIALQDPSELKRQCTYSYVCNENATDQNDDACAICGNGGDLV. 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02042 239 MobiDBLite consensus disorder prediction 20 80 - -
Seca12g02042 239 MobiDBLite consensus disorder prediction 65 80 - -
Seca12g02042 239 PANTHER PHD FINGER PROTEIN 12 40 239 IPR042163 GO:0003714|GO:0045892
Seca12g02042 239 MobiDBLite consensus disorder prediction 39 53 - -
Seca12g02042 239 Pfam Tify domain binding domain 148 197 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02042 Seca-Chr12 25016223 25016942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02042 109 239 PHD Transcription Factor Family AT4G14920 39.850 3.34e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02042 - - lja:Lj0g3v0191649.3 171.014