Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02041 ATGGATGCTGTTAATAAGCCACAGAATATTACTTATAAAGGATTAACTGACTTGGTGACTGAGACAGATAAAATGAATGGAGCTGCTATATTAGAAGTGGTGAAAAATAATTTTGAAGATCATCTTATTCTCGGGGAAGAAGGAGGAATTATAGGAGATGCAACATCTGATTATCTCTGGTGCATTGATCCTTTAGATGAGACTACAAGCTTTGCACATGGCTATCCCAGCTTTGCTGTTTCTGTTGAAGTTCTATATCGAGGGAATCATCTTGCTGCTTCAGTGGTTGAGTTTGTTGGAGGTCCCATGTGTCGGAATACCCGCATTTTCTCTGCAACTGCTGGTGGTGGAGCATTCTGCAATGGCCAAAGGATCCAAGTGAATGCTACTAATCAGGTGGAACAATCTCTTCTGACTGAGAAAAACTTCTGGAAGATGTTTGATGTTGGTCTATATGAGCATTGTAGGAAGAAGCATGGAGCTGCTGTCAGTTTTGGAGAGGAGAAAGTTGTCAAGAGCTGGCAGCTATTATTGTGTGTTGCTGTTGGTCTCTGGGAAGGTCTTATCATTGGATTTGTAACCGAGTACTCTGCTAGCAATGCATATAACCCTGTGGAAGATGTTGCTGACTCCTACAGGACTGGCGCTGCTACTAATGTTATCTTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTTCAATTATTGCCAATGCAATCAGTGTTTTCGTGAGTTTTACCTTTGCTGCCATTGGCAAGGGATTTGCAATTGGGTCTGCTGCGCTAGTATCTTTGGCCTTATTTGGTGCTTTTGTCAACAGGGCAGGAATTTCAACTGTTGATGTCTTGACTCATGATAAGGTCTTTATTGGACTTTTAGTGGGTGCCATGCTTCCTTACTGGTTTGCTGCCATGTATGGCACTGCTGTTGCTGCTCTTGGGATGCTGAGTACCGTAGCCACTGGATTGGCCATTGAAGCATATGGTCCAATCAGTGACAATGCTGGAGCGAAGTTTGCAGAACAACATGATGAAATTTACAACTTTTGGTGGTTTATTTTTGGCCGCTCCTAG 1074 0.4274 MDAVNKPQNITYKGLTDLVTETDKMNGAAILEVVKNNFEDHLILGEEGGIIGDATSDYLWCIDPLDETTSFAHGYPSFAVSVEVLYRGNHLAASVVEFVGGPMCRNTRIFSATAGGGAFCNGQRIQVNATNQVEQSLLTEKNFWKMFDVGLYEHCRKKHGAAVSFGEEKVVKSWQLLLCVAVGLWEGLIIGFVTEYSASNAYNPVEDVADSYRTGAATNVIFGLALGYKSVIISIIANAISVFVSFTFAAIGKGFAIGSAALVSLALFGAFVNRAGISTVDVLTHDKVFIGLLVGAMLPYWFAAMYGTAVAALGMLSTVATGLAIEAYGPISDNAGAKFAEQHDEIYNFWWFIFGRS. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02041 357 Pfam Inositol monophosphatase family 8 140 IPR000760 -
Seca12g02041 357 PRINTS Inositol monophosphatase superfamily signature 17 37 IPR000760 -
Seca12g02041 357 PRINTS Inositol monophosphatase superfamily signature 39 55 IPR000760 -
Seca12g02041 357 PRINTS Inositol monophosphatase superfamily signature 115 138 IPR000760 -
Seca12g02041 357 PRINTS Inositol monophosphatase superfamily signature 60 76 IPR000760 -
Seca12g02041 357 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 247 305 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca12g02041 357 FunFam Inositol-1-monophosphatase 1 125 - -
Seca12g02041 357 Pfam Inorganic H+ pyrophosphatase 247 305 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca12g02041 357 Pfam Inorganic H+ pyrophosphatase 159 249 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca12g02041 357 Pfam Inorganic H+ pyrophosphatase 304 337 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca12g02041 357 SUPERFAMILY Carbohydrate phosphatase 9 147 - -
Seca12g02041 357 Gene3D - 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02041 Seca-Chr12 24942987 24944060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02041 164 336 Primary Pumps ATPases AT1G15690 54.335 1.95e-44 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02041 K01092 - gmx:100796770 233.417