Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02015 ATGAAGGTCATTTGCAAGGATGGAGGAATATTGAAGAATCATGAAGCACGATTTGAAGACGAGACAATCATTTCAAAATCTGATGGGGTGGAATTCACTGTCGAAGAGGGTAACCACAATATGATATTTCTTTTATACAAGGTGTTTCTTTCCTACTTTGGCCAAGGCTGTGAAAACAATGGAGAAGGGAGAGAAAGTTCTCTTCAATGTGAAGCCACAATATGCATTCGTGAGAGTGGAAGGCCAACATCAAGAGATGTAGGTGTTGTACCTCCAAATGCTTCACTCCAAATATATCTCGAGTTAGTCTCGTGGAAGACACCATATCTGATATTACCAAGGATAGAAGGTTCTGAAGAAGACCTTGAAGGAAGGAGAAGGATAGGAACGACCAAATGA 399 0.406 MKVICKDGGILKNHEARFEDETIISKSDGVEFTVEEGNHNMIFLLYKVFLSYFGQGCENNGEGRESSLQCEATICIRESGRPTSRDVGVVPPNASLQIYLELVSWKTPYLILPRIEGSEEDLEGRRRIGTTK. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02015 132 Gene3D - 4 106 IPR046357 GO:0003755
Seca12g02015 132 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 106 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02015 Seca-Chr12 24502745 24503546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02015 1 107 Calmodulin-binding Proteins AT3G25230 36.220 1.70e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02015 K09571 - gmx:100819747 91.2781