Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g02008 ATGTCTGTGTGGTTGCAGCTCTTTGTTGGTGGCAACTGGAAGTGTGTAAGTATCTTACCCCCAAAACTCAGTAGCCCAAGTAGTACTCTATTAAGCAAGCTGAAGATAGAAGAGTCTCCAGACACGGGGAAGAAAAATTGTTCTGAGCCTGCACTTAAGAGGCCAAGAATTGAGATCCCATCTCCATTACCAACTTTTAAGGTTCGGAAAGAGAAACTGGGGGACCGAATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGGTGACTACTGAATTTATTTGGATGTTTCTTTCACTTTTTTTGATCTGCTTATATATATTGAATAGGCTATGA 339 0.41 MSVWLQLFVGGNWKCVSILPPKLSSPSSTLLSKLKIEESPDTGKKNCSEPALKRPRIEIPSPLPTFKVRKEKLGDRITALQQLVSPFGKVTTEFIWMFLSLFLICLYILNRL. 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g02008 112 CDD bHLH_AtbHLH_like 63 92 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g02008 Seca-Chr12 24287893 24288421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g02008 52 92 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G05170 85.366 7.51e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g02008 - - gmx:100805087 105.531