Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01957 ATGGGGATTGTGACGGCTATCTCAGAGGAGACAAAGCTGAACAAGGAAGGGAGGGTTACGCGTCTAATGTCCATAGAGTTGGTTGATGAAATGGGAGAGATTCGGTGTGCTATTTTCGGAAATATGGTGGACACTGTGAAGGGATATCTCACTGAGCCTCGCTGCGGACTTCCTGTGATGATCATTCAGCTGGCAAAGGTTAATGTCTATAAGGGCCAAGTTGGAATTCAAAATGTGATGAACGCGTCCAAAATCTGGTGGAATCCAGACATCCCTCAGGCTATGGAGTTCAAAAATGGGCTAGCAGTTCATGAGATTGAAAGTGATCTTGCTGTTTCACTCATACCCCAAAAGCCTCGCCCTGTCTCACTTAGAGAGGAGTTTTTGGAAATGTATCCGAAGAAGAGTGTTGGGGAGTTGAATCAACTGTTGGAGCAAGGGTCTTTCATTATTTTGGGAACAATAGCTGAAATCTTGGATGATAGTTTGTGGTGGTACATGGCATGTACATGTATGAAGTCTATTACCTATGAACCGGGCTTCCCTTTTTGCACTGGTTGTAACCTTCCTGTGTACGACATAACACCTAGGTACAAAATCAAGGTGGCTGTGACGGATGGAGAAGATATCACACACCTTATAATGTTTGATTCAGAATGTTGCTTTCTGCTAGATAAGTCTTGCTATGACCTGTCGGAGGAGGGAAAGGTTAATGGCTGCTCTGGTTATCCACAAGAAATAATGGATTTCGTGGGGAAGGAACTGCTTTACCGAGTTGAGATAAACGAAGATGCCATGCTTGCCTATGATGGGTGCATAAAGGTGAAGAAGTTGTGCTCTGACTCATCCATTATCAGTGAGTACAAAGAAAGAGTCGATGATGAGACTCCACTTAAGCTGAAGTACGCACCATTGTTTACAAAGATTGAAGATGCTCCAGGAAATAGCTGTGTGCTTGAGCTGTCTCCTCAGAGTAATTCTCTTCTAACTGATGCTGAATTCACACCAACCTCGTGTGGGGAATCATCTTCTGCTGATGAGTACAAAAAGGATTTGGGCAAGAGGCCACTTCAGGAGCCTCCCGAGTGTCCACCAATCAATTTGAAGAGGATCAAAGTGCAAGGAATTAAGATTGAGGACAACTGA 1146 0.4415 MGIVTAISEETKLNKEGRVTRLMSIELVDEMGEIRCAIFGNMVDTVKGYLTEPRCGLPVMIIQLAKVNVYKGQVGIQNVMNASKIWWNPDIPQAMEFKNGLAVHEIESDLAVSLIPQKPRPVSLREEFLEMYPKKSVGELNQLLEQGSFIILGTIAEILDDSLWWYMACTCMKSITYEPGFPFCTGCNLPVYDITPRYKIKVAVTDGEDITHLIMFDSECCFLLDKSCYDLSEEGKVNGCSGYPQEIMDFVGKELLYRVEINEDAMLAYDGCIKVKKLCSDSSIISEYKERVDDETPLKLKYAPLFTKIEDAPGNSCVLELSPQSNSLLTDAEFTPTSCGESSSADEYKKDLGKRPLQEPPECPPINLKRIKVQGIKIEDN. 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01957 381 Gene3D - 1 107 IPR012340 -
Seca12g01957 381 SUPERFAMILY Nucleic acid-binding proteins 1 102 IPR012340 -
Seca12g01957 381 CDD RPA1_DBD_B_like 1 98 - -
Seca12g01957 381 MobiDBLite consensus disorder prediction 332 364 - -
Seca12g01957 381 Gene3D - 130 279 IPR012340 -
Seca12g01957 381 SUPERFAMILY Nucleic acid-binding proteins 146 276 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01957 Seca-Chr12 23518604 23520461 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01957 25 263 Core DNA Replication Machinery Family AT5G08020 23.622 9.09e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01957 - - lja:Lj3g3v3527180.1 267.314