Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01920 ATGGCGAGTGGATGGATGAAGTCATTGCAATGCAAGTCAAGAGCATTTGAAGATGTGTACCATCCAAATCCCAAAATCCTTATACCCAGTGCTAGTTGCAGAAAAAGCGTTCAAACGATTAAAGACATGGTGGACATGCCCAGGCCCAAGCCCAAGTCCAGAAAATCAAAGCCTAAGCCTAGGCCATCCTTGGAAAAACATCCAAGTTCAAAATACCCAACGACCACCACAAAGCCCGAATTCGAAGTGCCAAAAGCCACCATGAACCGCTCAAGAAGTAGTAGCGTTAACACTACCACTCCTTCACGTGCTATCACTGAACTTCCTGAGGGGCACCCTTCCAGAAACGTCGTCGAGATTATCTTCCACACAAGCTGGGGGCCCAAGCCATTTCCGGGTCGGGTTGAAATGATATTCAAGGTCCAAAACGGGTCAAAGACCGTGTCGCGATTTGAGGAGTTTCGCGAGGCGGTGAAGACACGCGCCGCTGCTTCTCAGGGTTTGGATGAGGGGAGCAACTGGGAGGAGAATGCGCGGTGTGTCGCCGATGGGAATGAGGTTATGCGGTTTCACTGCTTGGGCCCCGCCGAGGATGGTGGTCACTACGGCGGCGGTGGCGCGTGGTCGTTTCCGGAGAGAAAGGGGTCTGCGGCGATCTGTACGTTTTCCGGCAGTGGCGAGGCGCATGAGGCTGCCGGCGGAGGCAGGGGCAGGAGGGCAATGTTGGTATGTAGGGTCATAGCGGGTCGGGTCTCAAAGCAAATCGGGTTTCTGGACTCGTTGTTGGACAAGCGAGTCGGGTTCGACTCAGTGAGTGGGGACAACGGCGAGTTGTTGGTGTTCGATTCGCGTGCGGTATTGCCTTGCTTTCTTATTATTTACAGGTTGTAA 891 0.5342 MASGWMKSLQCKSRAFEDVYHPNPKILIPSASCRKSVQTIKDMVDMPRPKPKSRKSKPKPRPSLEKHPSSKYPTTTTKPEFEVPKATMNRSRSSSVNTTTPSRAITELPEGHPSRNVVEIIFHTSWGPKPFPGRVEMIFKVQNGSKTVSRFEEFREAVKTRAAASQGLDEGSNWEENARCVADGNEVMRFHCLGPAEDGGHYGGGGAWSFPERKGSAAICTFSGSGEAHEAAGGGRGRRAMLVCRVIAGRVSKQIGFLDSLLDKRVGFDSVSGDNGELLVFDSRAVLPCFLIIYRL. 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01920 296 MobiDBLite consensus disorder prediction 68 105 - -
Seca12g01920 296 MobiDBLite consensus disorder prediction 30 109 - -
Seca12g01920 296 SUPERFAMILY ADP-ribosylation 105 295 - -
Seca12g01920 296 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 294 - -
Seca12g01920 296 Gene3D - 103 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01920 Seca-Chr12 22730094 22730984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01920 21 294 C2H2 Transcription Factor Family AT2G29660 33.439 4.94e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01920 - - gmx:100792099 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01920 12 22730094 22730984 Seca12g01920 12 22730094 22730984 ECH