Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01899 ATGGCAGAAAGACTACTCAACCTTTCTTTTCTGGTCCTGAGCCTTGTCCTTTACATGGCTACTAGCACTGCTGAATCCGCAGTTGCAAGACGACCCAACCCCAACCCAATAGACTTCATAAAATCCTCATGCAGGGCCACACTCTACCCTGCTGTGTGCGTTCAAAGTCTCATGGGTTATGCAAACGTGATTCGCCAAGACGAGCATCAACTAGCCATCACAGCCTTGAATGTGAGCGTGTGGAGGACTCGTTCAAGTGCATCATTTATGAAGAAGATGAGCAAGGTAAAGGGGATTAAGCCTAGAGATTATGGTGCTGTACAAGACTGCAAAGAGAACATGGATAATAGTGTGGACCGTCTTAACCAATCGGTGAAGGAGCTTGGGCTTACGGGTAAGGCCTTGGGCCAGGACCCAATGTGGCACATGAGTAACGTTCAGACTTGGGTCAGTGCTGCTCTAACGGATCAGAACACGTGTCTTGATGGGTTTTCCAGTCCTCATGTGGATAGAAACTTGAAGGCTACCATTAGTGCAAGGGTTGTTGATGTGTCTCAAGTCACTAGTAATGCCCTTGCATTGGTTAATCGCTTTGCCTCCAGGTACCGTACTGCTGCACACAACTGA 627 0.4801 MAERLLNLSFLVLSLVLYMATSTAESAVARRPNPNPIDFIKSSCRATLYPAVCVQSLMGYANVIRQDEHQLAITALNVSVWRTRSSASFMKKMSKVKGIKPRDYGAVQDCKENMDNSVDRLNQSVKELGLTGKALGQDPMWHMSNVQTWVSAALTDQNTCLDGFSSPHVDRNLKATISARVVDVSQVTSNALALVNRFASRYRTAAHN. 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01899 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 198 IPR035513 -
Seca12g01899 208 SMART PMEI_2 35 194 IPR006501 GO:0004857
Seca12g01899 208 FunFam Pectin methylesterase inhibitor 1 35 198 - -
Seca12g01899 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 194 - -
Seca12g01899 208 CDD PMEI-like_3 42 200 - -
Seca12g01899 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 198 IPR035513 -
Seca12g01899 208 NCBIfam pectinesterase inhibitor domain 7 196 IPR006501 GO:0004857
Seca12g01899 208 Pfam Plant invertase/pectin methylesterase inhibitor 38 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01899 Seca-Chr12 22209916 22210542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01899 30 195 Carbohydrate Esterase AT3G14310 30.178 1.22e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01899 - - gmx:100789460 255.758