Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01878 ATGGAGATGGGTGATAATGAAGTTGATTCAACTACACCATCAGAAGCTTTCAATGATCCCGTGAATACATCAAAGGAATGGATTCCTATGTGTGGTGAAGAATTTAAACCCGTAGTTGGCATGATCTTTGATACTTTAGAAGAAGGAGAAAACTTTTATAAAAGGTATTCACATGCGGTTGGTTTTAGTGTACGCAAATCATCTGAAACAAAAGATAAAAATGACGTCAAGTGGAAGTATTTTCTTTGCTCAAAACAAGGTTTCAAAGTTGAGCAAAATAAGGCCATAGCTGAGTTGCTTGTTGATGAAAAACAACTGCCTAAAACTAGAAGAAGAAAACTAACAAGGGAAGGGTGTAATGCAAAGATTGTTTTTAAGAGGACAATGGAAGAAAAATATGAAGTTGTGCGGTTTCATGAAGTTCATACACATGCCTTAGCCACACCTACAAAGAAGCAATTCTTAAGGTCTGCTAGGGAAGTAAGCAATGTTCACAAGAATCTATTACTTTTCTATAATAGAGCCAATGTAGGGCCTTCAAAAGTTTATCAATTATTGAAAGAGCAGGTTGGGAGTTATAGCAATATTGAATGCACAAAAAGAGATCTCCAAAATTATTCTAGAGATCTAAAAGAATTGATTAAAGACTCCGATGCACATATGTTTATGTTTATTGATAAGCAATTTGTTTTAACAAGTGTAATATCTATGTCATCAGTAACTCTGACATTCTTTTTCCATTTAGTTTTAACAATGTAG 759 0.3399 MEMGDNEVDSTTPSEAFNDPVNTSKEWIPMCGEEFKPVVGMIFDTLEEGENFYKRYSHAVGFSVRKSSETKDKNDVKWKYFLCSKQGFKVEQNKAIAELLVDEKQLPKTRRRKLTREGCNAKIVFKRTMEEKYEVVRFHEVHTHALATPTKKQFLRSAREVSNVHKNLLLFYNRANVGPSKVYQLLKEQVGSYSNIECTKRDLQNYSRDLKELIKDSDAHMFMFIDKQFVLTSVISMSSVTLTFFFHLVLTM. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01878 252 MobiDBLite consensus disorder prediction 1 21 - -
Seca12g01878 252 MobiDBLite consensus disorder prediction 7 21 - -
Seca12g01878 252 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 208 - -
Seca12g01878 252 Coils Coil 196 216 - -
Seca12g01878 252 Pfam FAR1 DNA-binding domain 51 147 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01878 Seca-Chr12 21768045 21768803 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g01878 FAR1 2.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01878 - - tpra:123895784 280.796