Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01856 ATGGCTCGTCACGTGCTCAAAGACCAAGACACCATTTTCGCCAACCGTGACGTGCCCGCCGCCGGCAGGGCTGCCACCTACGGCGGCACCGACATAGCCTGGAGTCCGTACGGACCTGAATGGCGGATGCTGAGGAAAGTGTGCGTGCAGAAGATGCTCAGCAATACCACCCTGGATTCCGTGTACGATCTCCGCCGCAAGGAAGTCCGAAACACGATCGGGTACCTGTATATTCGGGTCGGGTCACCGGTGAATGTGGGGGAACAGGTGTTCTTGACGGTGCTGAACGTTATCACGAACATGATGTGGGGCGGGGCGGTTGAAGGAGCGGAGAGGGAAAGCTTGGGGGCGGAGTTCAGAGAGGTGGTGGCGGAGATGACGCAGCTTTTGGGGAAACCGAACGTGTCGGACTTTTTTCCCGGGTTAGCCCGATTCGATTTGCAAGGTGTGGAGAAAGAGATGAATGCGTTGGTCCCGAGGTTGGATAGGATATTCGAAAAGATGATTGGTGAACGGGGGAAGGAGAATGAAAGCAAGGACTTTCTGCAGTTTTTGTTGAATTTGAAGGAAGAGAGTGATTCCAAGACACCACTCACCATCACTCACGTTAAGTCCCTCCTCATGGATATGGTTGTCGGTGGATCGGATACATCCTCCAACACAATTGAGTTTGCAATGGCAGAAATAATGCACAACCCAAAGGTAATGAAGAAAGTTCAAGAGGAATTGGAAGTTGTGGTTGGGAAAGAAAATATGGTAGAAGAGTCTCATATTAATAAGTTGTCATACTTGCACGCTGTGAAGAAACTCTTCGATTGCATCCTGCACTTCCACTTTTAG 840 0.5083 MARHVLKDQDTIFANRDVPAAGRAATYGGTDIAWSPYGPEWRMLRKVCVQKMLSNTTLDSVYDLRRKEVRNTIGYLYIRVGSPVNVGEQVFLTVLNVITNMMWGGAVEGAERESLGAEFREVVAEMTQLLGKPNVSDFFPGLARFDLQGVEKEMNALVPRLDRIFEKMIGERGKENESKDFLQFLLNLKEESDSKTPLTITHVKSLLMDMVVGGSDTSSNTIEFAMAEIMHNPKVMKKVQEELEVVVGKENMVEESHINKLSYLHAVKKLFDCILHFHF. 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01856 279 Gene3D Cytochrome P450 1 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01856 279 PRINTS E-class P450 group I signature 93 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01856 279 PRINTS E-class P450 group I signature 1 16 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01856 279 PRINTS E-class P450 group I signature 202 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01856 279 PRINTS E-class P450 group I signature 222 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01856 279 PANTHER OS08G0547900 PROTEIN 1 269 - -
Seca12g01856 279 SUPERFAMILY Cytochrome P450 1 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01856 279 Pfam Cytochrome P450 1 267 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01856 Seca-Chr12 21390930 21393526 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01856 1 269 Cytochrome P450 AT4G12300 60.650 5.28e-115 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01856 - - gmx:100783085 441.039