Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01851 ATGATTCTCCTCTCAACTTTGTTTCAAAACCTCAACATGAAGGATTGGTACAGTGACAACACAACCCTGGTAGTAGCACTATTGGTCATTTCTACCTTTACTTGGTACACGTGGTTGTATTTCCTCAAACCCAATACCCAGAAGCTGCCACCAGGCCCATCGGGCCTCCCTTTCTTCGGAAACCTTTTATCCCTGGACCCGGACCTTCACACTTACTTCGCCGGGTTGGCCCGTACCCATGGCCCAATTTTCAAGCTCCAACTCGGGAGCAAGCTTGGTATCGTGTTATCTTCACCTTCCATGGCTCGCCAAGTGCTCAAAGACCACGACACCGTTTTCGCCAACCGTGACGTGCCCGCCGCCGGCAGGGTGGCCACCTACGGCGGGTCCGACATAGTATGGACCCCGTACGGACCCGAATGGAGGATGCTGAGGAAAGTATGCGTGCTCAAGATGCTCAGCAACACAACCCTTGATTCCGTGTACGATCTACGACGCAAGGAGGTTCGAAAAACGGTGGGTTATATTCGCAGTCGGGTCGGGTCTCCGGTGAATGTGGGGGAGCAGGTGTTCTTGACGGTGCTGAACGTGATCACGAACATGATGTGGGGCGGGGGAGTTGAAGGAGCGGAGAGGGAAAGCTTGGGGGCGGAGTTCAGGGAGGCGGTGGCGGAGATGACGCAGCTTCTGGGGAAGCCAAACTTGACGGACTTCTTTCCCGGGTTGGCCCGATTCGATTTGCAAGGTGTGGAGAAACAGATGCATGCTTTGGTCCCGCGTTTCGATAGAATATTTGAAAAAATGATCGGTGAACGAGTGAATAGGGAGAGGGATGGGAAGGAGAGAGAAAGCAAGGATTTTCTGCAGTTTTTGTTGAATTTGGAGGAGGAAGGTGATTCCAAGACGCCATTCACCATCACCCACATCAAGGCCCTCCTCATGGACATGGTTGTCGGAGGATCGGACACATCCTCCAACACAATTGAGTTTGCAATGGCAGAAATGATGCATAAGCCAGAGGTAATGGAGAAAGTTCAAGAGGAATTGGAATTTGTAGTTGGGAAAGAAAACATGGTAGAAGAGTCTCATATTCATAAGTTGCCCTATTTGCATGCTGTGATGAAAGAAACTCTTCGGTTGCATCCTGCACTTCCCCTTTTAGTCCCTCACTGCCCTAGTGAGACCACCATTGTGGAAAACTACACAATCCCTAAAGGATCTCGGGTGTTTGTGAACGTGTGGGCTATTCATAGAGACCCTTCCATTTGGGAGAAACCACTAGAGTTTGATCCTACAAGGTTCTTGGATGCCAAATGGGATTATAGTGGAAATGACTTCAATTATTTTCCCTTTGGCTCTGGAAGAAGAATATGTGCAGGAATAGCAATGGCTGAGAGGACAGTTTTGTACTTTCTTGCGACATTGGTGCACTTATTTGATTGGACAATACCCCAAGGGGAAAAGTTGGATGTGTCCGAGAAATTTGGTATTGTTCTAAAAAAGAAAATACCTTTGGTTGCCATCCCCACCACACGATTGTCCAATTCAAATCTTTATAAATACAATTGA 1569 0.485 MILLSTLFQNLNMKDWYSDNTTLVVALLVISTFTWYTWLYFLKPNTQKLPPGPSGLPFFGNLLSLDPDLHTYFAGLARTHGPIFKLQLGSKLGIVLSSPSMARQVLKDHDTVFANRDVPAAGRVATYGGSDIVWTPYGPEWRMLRKVCVLKMLSNTTLDSVYDLRRKEVRKTVGYIRSRVGSPVNVGEQVFLTVLNVITNMMWGGGVEGAERESLGAEFREAVAEMTQLLGKPNLTDFFPGLARFDLQGVEKQMHALVPRFDRIFEKMIGERVNRERDGKERESKDFLQFLLNLEEEGDSKTPFTITHIKALLMDMVVGGSDTSSNTIEFAMAEMMHKPEVMEKVQEELEFVVGKENMVEESHIHKLPYLHAVMKETLRLHPALPLLVPHCPSETTIVENYTIPKGSRVFVNVWAIHRDPSIWEKPLEFDPTRFLDAKWDYSGNDFNYFPFGSGRRICAGIAMAERTVLYFLATLVHLFDWTIPQGEKLDVSEKFGIVLKKKIPLVAIPTTRLSNSNLYKYN. 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01851 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Seca12g01851 522 Gene3D Cytochrome P450 42 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 SUPERFAMILY Cytochrome P450 50 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PANTHER OS08G0547900 PROTEIN 14 520 - -
Seca12g01851 522 FunFam Cytochrome P450 - like protein 39 506 - -
Seca12g01851 522 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 Pfam Cytochrome P450 50 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01851 522 CDD CYP76-like 77 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01851 Seca-Chr12 21317353 21319479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01851 13 519 Cytochrome P450 AT4G12300 59.649 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01851 - - gmx:100783085 838.18