Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01846 ATGGATTATTTCCTTTTGATTGCTCTCACTTTGGTGTTGAGCTTCCAAATTCATATTGCACAAGGAAGTGAACTGCTCCCTGCCACTGAGAGTCCTAAGACTAGCAACTCACAAACCTACATTATCCATGTGAAGAGGCCAGAAGGTAAGATGTTTACTCAATCAGAGAATTTAGAGAGCTGGTACCGTTCATTCATGCCACCTACTGTTATGAGCTCTCAGGAACAGCCACGAATGATTTATTCATACCACAATGTGTTGAGTGGTTTTGCTGCAAGACTCACTCAAGAGGAGCTCAGAGCAGTGCAAGAGAAAAATGGCTTTATCTCAGCTCATCCTGAAAGGATACTGCGTCGTCAAACCACACATACCCCAAAATTCTTGGGGTTGCAGGAACAAATGGGATTGTGGAAAGAATCAAATTTTGGAAAAGGAGTTATTATTGGGGTGCTTGATTCTGGAATCACACCTGATCATCCTTCATTTAGTGATGCAGGAATGCCACCACCACCACCCAAATGGAAAGGGAGATGTGAACTTAATGGGACAGCTTGTAACAACAAACTTATTGGAGCAAGGTCTTTCAACATTGCAGCTACGGCAATGAAAGGAGAGGCACCAATTGATGAGGATGGACATGGGACTCACACAGCAAGCACAGCAGCTGGTGCTTTTGTGGACTATGCAGAAGTACTAGGAAATGCCAAAGGCACAGCAGCAGGGATGGCCCCTTATGCTCACTTGGCAATTTACAAAGTATGCTTTGGAGAAGACTGCCCTGAGAGTGATATTCTAGCTGCCTTAGATGCAGCTGTGGAGGATGGTGTGGATGTAATATCCATATCCCTTGGTCTAAGTGAGCCACCTCCATTTTTCAATGATAGTACTGCAATAGGTGCATTTGCAGCAATTCAAAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAACTTTGGCCCTTCTGATGGCTCCTTAGTTAATGGAGCCCCATGGATCCTCACAGTTGGAGCAAGCACTATTGACAGAAGGATTGTAGCAGCAGCAAAACTTGGAAATGGGCAAGAATTTGATGGTGAATCAGTTTTCCAGCCTTCCAATTTTTCCTCAACATTGCTATCCTTAGCATATGCTGGAAAGGATGGTAAACTAGAATCTGCACTTTGTGCTAATGGATCCTTGAATGACATTGATTTTAGAGGAAAGGTTGTTTTGTGTGAGAGAGGTGGGGGTATAGCAAGAATTGCCAAAGGAGAGGAAGTAAAAAGAGTAGGTGGTGCAGCCATGATTCTCATGAATGATAAAATCAATGGCTTCAGTCTAGCAGCTGATGTACATGTTCTACCTGCAACACATGTAAGCTATGCTGCTGGACTAAAGATCAAGACTTACATAAACTCCTCTGTAACACCTACAGCAACCATTTTATTTAAGGGAACTATTATAGGAGACTCCCAATCCCCTGCTGTTTCATCCTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTTTGAAACCAGATATCATAGGACCAGGTGTGAACATCCTAGCTGCATGGCCATTCCCTCTGGATAACAGCACCAATTCAAAACTCACTTTCAACATCATGTCTGGCACATCAATGTCATGCCCACATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTCATTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCAGCAGACACACTAGACTTGGAAAACAAACCAATTGTTGATGAAACACTTCAGCCTGCAAATATCTTTGCCACAGGTTCTGGCCATGTGAATCCATCAAGAGCAAATGATCCTGGATTAGTTTATGATATCCAACCTGATGATTATATACCTTACCTTTGTGGTTTAGGCTACAGTGATGGGGAAGTTGGAATCATTGCCCATAAAACAGTTAGGTGTTCTGAGACTTCAAGCATTCCTGAAGGAGAGCTCAACTACCCCTCATTTTCTGTTGTGCTTGGTTCCTCACGGACATTCACAAGGACTGTGACAAATGTAGGTGAGGCCTATTCATCCTATGTTGTCCTTGTTTCAGCACCAGAAGGGGTTGATGTGAAGGTTAAGCCAAATAAGCTTTACTTTTCAGAAGCAAATCAGAAAGAGACATATTCAGTGACATTCAGCCGTATAGGATTGGGTAATGAGACAGAGGAATATGCTCAAGGGTTTCTAAAATGGGTCTCTTCCAAACACACTGTAAGGAGCCCTATCTCAATTAAATTTGTATAA 2262 0.4293 MDYFLLIALTLVLSFQIHIAQGSELLPATESPKTSNSQTYIIHVKRPEGKMFTQSENLESWYRSFMPPTVMSSQEQPRMIYSYHNVLSGFAARLTQEELRAVQEKNGFISAHPERILRRQTTHTPKFLGLQEQMGLWKESNFGKGVIIGVLDSGITPDHPSFSDAGMPPPPPKWKGRCELNGTACNNKLIGARSFNIAATAMKGEAPIDEDGHGTHTASTAAGAFVDYAEVLGNAKGTAAGMAPYAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLSEPPPFFNDSTAIGAFAAIQKGIFVSCAAGNFGPSDGSLVNGAPWILTVGASTIDRRIVAAAKLGNGQEFDGESVFQPSNFSSTLLSLAYAGKDGKLESALCANGSLNDIDFRGKVVLCERGGGIARIAKGEEVKRVGGAAMILMNDKINGFSLAADVHVLPATHVSYAAGLKIKTYINSSVTPTATILFKGTIIGDSQSPAVSSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLDNSTNSKLTFNIMSGTSMSCPHLSGIAALLKSSHPHWSPAAIKSAIMTSADTLDLENKPIVDETLQPANIFATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDGEVGIIAHKTVRCSETSSIPEGELNYPSFSVVLGSSRTFTRTVTNVGEAYSSYVVLVSAPEGVDVKVKPNKLYFSEANQKETYSVTFSRIGLGNETEEYAQGFLKWVSSKHTVRSPISIKFV. 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01846 753 ProSiteProfiles Serine proteases, subtilase domain profile. 127 607 - -
Seca12g01846 753 CDD PA_subtilisin_like 348 473 - -
Seca12g01846 753 Pfam PA domain 384 459 IPR003137 -
Seca12g01846 753 CDD Peptidases_S8_3 120 574 IPR034197 -
Seca12g01846 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 119 IPR037045 -
Seca12g01846 753 Gene3D Peptidase S8/S53 domain 145 620 IPR036852 GO:0004252|GO:0006508
Seca12g01846 753 FunFam Subtilisin-like protease SBT1.5 145 364 - -
Seca12g01846 753 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 148 159 IPR023827 -
Seca12g01846 753 FunFam subtilisin-like protease SBT1.5 340 480 - -
Seca12g01846 753 Pfam Peptidase inhibitor I9 39 118 IPR010259 -
Seca12g01846 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 749 IPR045051 -
Seca12g01846 753 SUPERFAMILY PA domain 389 469 IPR046450 -
Seca12g01846 753 Pfam Fibronectin type-III domain 654 750 IPR041469 -
Seca12g01846 753 Pfam Subtilase family 143 582 IPR000209 GO:0006508|GO:0008236
Seca12g01846 753 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Seca12g01846 753 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Seca12g01846 753 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Seca12g01846 753 Gene3D - 340 481 - -
Seca12g01846 753 SUPERFAMILY Subtilisin-like 120 611 IPR036852 GO:0004252|GO:0006508
Seca12g01846 753 Gene3D - 624 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01846 Seca-Chr12 21188107 21190368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01846 25 752 Subtilisin-like Serine Gene Family AT1G04110 44.792 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01846 - - gmx:100812208 1264.6