Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01845 ATGACTTCAGCAGACACACTAGACTTAGAAAACAAACCCATTGTTGATGAAACACTTCAGCCTGCAAATATCTTTGCCACAGGTTCTGGCCATGTGAATCCATCAAGAGCAAATGATCCTGGATTAGTTTATGATATCCAACCTGATGATTATATACATTATCTTTGTGGTTTAGGCTACAGTGATGGGGAAGTTGGAATCATTGCCCATAAAACAATTAGATGTTCTGAGACTTCAAGCATTCCTGAAGGAGAGCTCAACTACCCCTCATTTTCTGTTGTGCTTGGTTCCTCACAGACATTCACAAGGACTGTGACAAATGTAGGTGAGGCCTATTCATCTTATGTTGTCCTTGTTTCAGCACCAGAAGGGGTTGATGTGAAGGTTAAGCCAAATAAGCTTTACTTTTCAGAAGCAAATCAGAAAGAGACATATTCAGTGACATTCAGTCGTATAGGATTGGGTAATGAGACAGAGGAATATGCTCAAGGGTTTCTAAAATGGGTCTCTTCCAAACACACTGTAAGGAGCCCTATCTCAGTTAAATTTGTATAA 555 0.3982 MTSADTLDLENKPIVDETLQPANIFATGSGHVNPSRANDPGLVYDIQPDDYIHYLCGLGYSDGEVGIIAHKTIRCSETSSIPEGELNYPSFSVVLGSSQTFTRTVTNVGEAYSSYVVLVSAPEGVDVKVKPNKLYFSEANQKETYSVTFSRIGLGNETEEYAQGFLKWVSSKHTVRSPISVKFV. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01845 184 FunFam Subtilisin-like protease SBT1.5 55 184 - -
Seca12g01845 184 Pfam Fibronectin type-III domain 85 181 IPR041469 -
Seca12g01845 184 Gene3D Peptidase S8/S53 domain 1 51 IPR036852 GO:0004252|GO:0006508
Seca12g01845 184 Gene3D - 55 183 - -
Seca12g01845 184 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 181 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01845 Seca-Chr12 21180242 21180796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01845 1 183 Subtilisin-like Serine Gene Family AT1G04110 44.792 6.57e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01845 - - lja:Lj4g3v1327510.1 329.717