Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01835 ATGCAGGAAGAGTTCAGATCCTCTTTGCATCTAAAGGAAGGTGATATCAACATGGCAAAGAAGATCGAGCATCTAGAACTTTCCAAAAGGAAGCTTTTGGGAGATGGATTGGATACATGCGCTATTGACGAGTTACAACAGATAGAGAACCAGCTCGAACGCAGCTTAAGCAAAATTAGGGCAAAAAAGAGTCAATTGTTCAGGGAGCGAATTGAGAAGCTAAAAGAAGAGGAAAGGCTCCTACTTGAAGAAAATAGACGCTTACACGAGCAGTGTCGGATTGAACAACAGCGTTCTTTAAGTAAAGAAGATATGGAACTCATCACAGAAAAGCATGGCGAGGAGGAAGTGGAGACGGAGTTGTTCATAGGGCGACCAGAGAGACGAATGCCTTGA 396 0.4343 MQEEFRSSLHLKEGDINMAKKIEHLELSKRKLLGDGLDTCAIDELQQIENQLERSLSKIRAKKSQLFRERIEKLKEEERLLLEENRRLHEQCRIEQQRSLSKEDMELITEKHGEEEVETELFIGRPERRMP. 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01835 131 Coils Coil 42 91 - -
Seca12g01835 131 Pfam K-box region 16 92 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca12g01835 131 ProSiteProfiles K-box domain profile. 8 100 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca12g01835 131 MobiDBLite consensus disorder prediction 108 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01835 Seca-Chr12 21022339 21025293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01835 18 129 MADS-box Gene Family AT4G22950 54.783 3.25e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01835 - - gmx:100805260 151.369