LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca12g01800	ATGGGTTTTGATGATTTCACCAACAAGGATGATGAAGGTCCACTTCCAGGGTTCCGATTCCACCCCACAGATGAAGAACTTGTAGGTTTCTATCTTCGCCGAAAGCTTGACAAGAAACCCATTAGCCTCGAACTCATCAAACAGATCGATATATACAAATATGATCCATGGGATCTTCCAAGTCCATGCATGTTGCAAATTTTAATAATTTGTTTGTATATATATATATATGCAGAAAGCAGTACTAGTGGTGGGGAGAAGGAGTGGTACTTCTTTTGCAAAAGAGGGAGAAAGTACAGGAATAGCATAAGGCCCAATAGGGTGACTGGCTCAACCAGTGAAACTCAAACATGA	354	0.4068	MGFDDFTNKDDEGPLPGFRFHPTDEELVGFYLRRKLDKKPISLELIKQIDIYKYDPWDLPSPCMLQILIICLYIYIYAESSTSGGEKEWYFFCKRGRKYRNSIRPNRVTGSTSETQT.	118

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Seca12g01800	117	PANTHER	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	14	111	-	-
Seca12g01800	117	Gene3D	NAC domain	23	117	IPR036093	GO:0003677\|GO:0006355
Seca12g01800	117	ProSiteProfiles	NAC domain profile.	14	117	IPR003441	GO:0003677\|GO:0006355
Seca12g01800	117	SUPERFAMILY	NAC domain	12	111	IPR036093	GO:0003677\|GO:0006355
Seca12g01800	117	Pfam	No apical meristem (NAM) protein	16	110	IPR003441	GO:0003677\|GO:0006355

Showing 1 to 5 of 5 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca12g01800	Seca-Chr12	20432264	20433018	Transposed

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca12g01800	15	111	NAC Transcription Factor Family	AT1G26870	60.825	6.20e-36	125

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	NAC	Seca12g01800		NAM	1.4e-20	No_clan

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca12g01800	-		-	sind:105175173	152.525

Showing 1 to 1 of 1 entries