Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01771 ATGGCTTCTAGTTCTGGAAAACGACGTTTGTGTGATCATTTTTCACTTATACAAACCACCAAACATGCCCCAAGGCCTTCCCTTTTACTCAAAGACTACCTCAGGGACGATTTAAGCTCGTGTTCATCGAGCGGTTTCAAATCGTTCCCGCGCCGACAATGCTGCTCAACCGTTGGATTGAAGGATCTCCAACTGAAACACAAGAGGAGAAACACGTTCCCTCGACGAACCACTCCTTCTTCTTCTTCTACCATAACGGTTCTGCAGAGAGCTTCCGAAGCGGTAATCAACGTCATCAAGTCACTGCCATTGTCACAAAAGAGCGCCAAAGCTAAGAAAGCTGCTACGTGTCTTCTTTCGAGAAGCCTCTCGAGGAAGCTGTTGAGCAGAAGCTTCTGGAGAAAAGCAGCAGCGAAGGAAGAGGGAAATAGCAAAGGTGCCCCGAGGAGAAGGAGATCTTTCCGCGAACTCCTTTTGCAGGAACGAGATCATAAAGCGACGTCGTTCAATGAGGATACTATATTCACTGCCCCAAGCATCATCACAACCACCACCTCATCTTCAGGTTGTGGCAGTAACAGCTGGGGAGAGAGCGAGTTCACTTTCTCATCAACCGCTACTTCTTCTGACAGCTACACTGAAAATGACCTACTTGACGGTACCAAAGATGGTGAGCCCCATCACAAGATCGAAAGAGTAACAACCACGCAGGATTGGCCAAATGAGAAGGAACAATCCAGTCCAGTATCAGTGCTAGATTTTGAAGATGATGAAGAAATTAAGTCACATTTCAATTCCACTGCTCCTTCCTTCTTAGAAGGAACGGAACACAAGCATATCCCGAAGAGACGACACTTTAAAAGTGTAGCATCACTAGAGCCAGTGGCATTAGAGAAAAGGATCGCATTGTCAGAACAGAGAGATGAACCACACAACCATTCCACAAAACAATGTTCAGTATTAGCCAAAAATGGAAACAGCAACGTTCTTAATGACAAGATCGAAGAGAATGCGCGCAACCTTCTCAACTTGGTTAAAAGGTCACATCCATTCAACTGTTTGATAATTAAGGCAGAGAATCTACTGTTTGATTACTTCAAGCAGAGCATTTGGGAAAATAATGATATTGATGACCATTCAAAGAAGCTTCACCTTCGCAAGGTAGCTGAGGATTGGATACAGGGGGAAACCCAAGAACTGTATTTGGGTTGGGAAGTGAAAGAAGGAAGAGGGATCTACATTAGGGAGATGGATAAATGTGGGGAGTGGAAAAACTCTGATCAAGAAAACCAACAATTGGCTCTGGAGCTGGAAAACGAGGTCTTCAATAGTTTGATTAACGAGCTCGTCCTTGACCTCACCATCTGA 1368 0.4481 MASSSGKRRLCDHFSLIQTTKHAPRPSLLLKDYLRDDLSSCSSSGFKSFPRRQCCSTVGLKDLQLKHKRRNTFPRRTTPSSSSTITVLQRASEAVINVIKSLPLSQKSAKAKKAATCLLSRSLSRKLLSRSFWRKAAAKEEGNSKGAPRRRRSFRELLLQERDHKATSFNEDTIFTAPSIITTTTSSSGCGSNSWGESEFTFSSTATSSDSYTENDLLDGTKDGEPHHKIERVTTTQDWPNEKEQSSPVSVLDFEDDEEIKSHFNSTAPSFLEGTEHKHIPKRRHFKSVASLEPVALEKRIALSEQRDEPHNHSTKQCSVLAKNGNSNVLNDKIEENARNLLNLVKRSHPFNCLIIKAENLLFDYFKQSIWENNDIDDHSKKLHLRKVAEDWIQGETQELYLGWEVKEGRGIYIREMDKCGEWKNSDQENQQLALELENEVFNSLINELVLDLTI. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01771 455 MobiDBLite consensus disorder prediction 205 227 - -
Seca12g01771 455 PANTHER OS04G0572500 PROTEIN 21 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01771 Seca-Chr12 19959829 19963405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01771 28 455 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 29.769 3.26e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01771 - - gmx:102663212 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01771 12 19959829 19963405 Seca12g01771 12 19959829 19963405 ECH