Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01763 ATGTTGGCTGGTTGTTCTAGTTCAACATTGTTGTCACCAAGGCACAGATTAAGGAGTGAAGCATCTGCACAGTTTCAAGCTTGTCATTTACAGTTACCTTCCATGAGCACACAGAGATTGGACTTGCCATGTAGCTTCCCAAGGAAAGACACCACATCCTCACGTTCACAACCTTTGAGGCCCGTGGGGATTTCAGTGGAGAAGCCTATTGAAGCCAAGAACAGCACTTGTTCTCTGAAGCAGAACATTCGACTTCCACCTTTGGCAACAACCACAAGTGCTCAAACAACAGCGCAGCCATTTGGAGAGATCAAGGAGGAGCTTTGGGAGAAAAGCAGCAAGGGTTTGAAGAGACAGCTTTCAGAACATCATGATGAGTCCTTCACCAACAGAGCCAAGAGGAAAAGGGGTAGCAGTGGTAATGGGAATGATTCTGATGAAGGTTTGAGTTTAGCAGCTCAAATGGGTGCTGGCAATTTTTGGTCTGTTCAGAGTTTTGGAGGTCTTAACCACCCTTCACTTCCTTTCTCTCTCAATTGTTCTGGAGATGAGGAAAGTGTCATTTTTGCTCCTGCTGAAGTGGTTTCTGCTCCTTTGCCTTTATCCAACAATCCTTGGCTGGAATCTGCTGTAACAAAGATCACCAATTTTGGTGAGGGTAGCCACCACCAACAACATCATCACCATGTCAAGGAAGGTTCAGTCTCTAATGCTTCATCAGAGAGCCAGAGCTTGAGCCTGAGGTTAAATGAGAATGCATCAGAACATGAAGTGGGGAATGGTTCAGAGAATCCTTATCACCATGAAGGCACTGAGGTGGAGACAGGAGAAGAGGATGAACAAGAGGAGAATCGTGGGTTTGAGCTTGTTAGCTTGCTCACTGGTTGTGTTGATGCTATTGGATCAAGGAATGTCACTGCAATCAACCATTTCATAGCTAAATTGGGTGATCTTGCATCTCCAAGGGGAACCACCATAAGCCGCATTTGTGCTTACTTTACTGAGGCTTTGGCCATCAGGGTCACCAGGCTTTGGCCTCATATCTTTCATGTCACCACCACTTCTAGGGACCTAGATAGGGTGGTGGATGATGATGAAACTGGCACTGCATTGAGGCTTCTAAACCAGGTTAGCCCAATTCCAAAGTTTCTTCATTTCACATCAAATGAGATGCTTTTGAGGGCTTTTGAAGGGAAAGACAGGGTTCACATTATTGATTTTGACATCAAGCAAGGACTTCAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCAAGGGCCAATCCTCCAAGCCATGTTAGAATCACTGGTGTAGGAGAGTCCAAACAAGAGCTGAATGAAACAGGAGACAGACTTCATGGGTTTGCTGAGGCATTGAATCTTCCCTTTGAGTTTCATCCAGTGGTGGATAGACTAGAAGATGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAGAGTGTTGCTGTGAATTGCGTTTTGCAGCTTCACAAGACACTTTATGATGGTAGTGGAGGAGCATTGAGGGATTTTTTGGGTCTCATTCGTAGCACAAATCCTACTATTGTGGTTATGGCAGAACAAGAAGCAGAACACAATGAGGCCAGGTTGGAAACAAGGGTGTGCAATTCATTGAAGTATTATGCAGCTCTATTTGATTCAATTGATCACAGTGGCCTTCCACAAGAGAGTCCAGTGAGGATTAAGATAGAGGAGATGTATGCTAGGGAAATCAGGAACATCATTGCATGTGAAGGAAGGGACAGGTTGGAGAGACATGAGAGTTTTGGCAATTGGAGAAAGATGATGGTGGAGCATGGAGGGTTCAGATGCATGGGAGTTACAGAGAGGGAAATGATTCAGAGCCAGTTGCTGTTGAAGATGTATTCTTGTGAGAATTACAGTGTCAAGAAGCAGGAGAAGGAAGGAGCAGCAGCAGTTACTTTGGGTTGGCTTGATCAACCTCTATATACAGTCTCAGCATGGGCACCAGTTGATGCTGCTGGCAGCTCATCCTCTTTTTCTCAGCCAATTTGA 2034 0.4508 MLAGCSSSTLLSPRHRLRSEASAQFQACHLQLPSMSTQRLDLPCSFPRKDTTSSRSQPLRPVGISVEKPIEAKNSTCSLKQNIRLPPLATTTSAQTTAQPFGEIKEELWEKSSKGLKRQLSEHHDESFTNRAKRKRGSSGNGNDSDEGLSLAAQMGAGNFWSVQSFGGLNHPSLPFSLNCSGDEESVIFAPAEVVSAPLPLSNNPWLESAVTKITNFGEGSHHQQHHHHVKEGSVSNASSESQSLSLRLNENASEHEVGNGSENPYHHEGTEVETGEEDEQEENRGFELVSLLTGCVDAIGSRNVTAINHFIAKLGDLASPRGTTISRICAYFTEALAIRVTRLWPHIFHVTTTSRDLDRVVDDDETGTALRLLNQVSPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRANPPSHVRITGVGESKQELNETGDRLHGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPTIVVMAEQEAEHNEARLETRVCNSLKYYAALFDSIDHSGLPQESPVRIKIEEMYAREIRNIIACEGRDRLERHESFGNWRKMMVEHGGFRCMGVTEREMIQSQLLLKMYSCENYSVKKQEKEGAAAVTLGWLDQPLYTVSAWAPVDAAGSSSSFSQPI. 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01763 677 MobiDBLite consensus disorder prediction 112 141 - -
Seca12g01763 677 Pfam GRAS domain family 289 661 IPR005202 -
Seca12g01763 677 MobiDBLite consensus disorder prediction 235 259 - -
Seca12g01763 677 MobiDBLite consensus disorder prediction 220 234 - -
Seca12g01763 677 MobiDBLite consensus disorder prediction 219 284 - -
Seca12g01763 677 ProSiteProfiles GRAS family profile. 280 662 IPR005202 -
Seca12g01763 677 MobiDBLite consensus disorder prediction 112 149 - -
Seca12g01763 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 239 658 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01763 Seca-Chr12 19618279 19621618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01763 1 661 GRAS Transcription Factor Family AT1G63100 55.908 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca12g01763 GRAS 3.7e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01763 - - lang:109333178 947.577