Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01752 ATGGAAGACGAAATGAACAGGGAACTCGAGCTTCTACCATCATCCCGCGCCGATTCCTCGCTGCTGCGTCTGCGATCAACAACGACGACTACGGAGGGAGGCGCTCCGTCGTTAGACCTGCAACTATCGATCAGCGTAGGTCCACCAGCGGTGCTGATGTGCGAGGGAGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATCCGTCTGGCGGCGATGGAGAAGGCGTATGCAGAGAGAGTGAGAGAGCTGACGAGGAGAGAGATGGAAATGGCACAGTCTGAGTTCGCACGTGCGAGGCAAATGTGGGAGCGTGCGAGGGAAGAGGTTGAAAGAGCTGAGAGGATCAAAGAAAGAGCTACAAGACAGGTGGATTCTACGTGCATGGAGATCACTTGCCATTCCTGCAGGCAAAGGTTCAGGCCTGCTTCTGCTTAA 438 0.5594 MEDEMNRELELLPSSRADSSLLRLRSTTTTTEGGAPSLDLQLSISVGPPAVLMCEGVEALKWQAAEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVERAERIKERATRQVDSTCMEITCHSCRQRFRPASA. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01752 145 PANTHER OS03G0310200 PROTEIN 27 142 - -
Seca12g01752 145 Coils Coil 82 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01752 Seca-Chr12 19459014 19459451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01752 64 141 C2H2 Transcription Factor Family AT2G01940 40.506 3.34e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01752 - - var:108340281 205.297