Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01746 ATGTCTTTGTCCATTTGTCATGTGTTACTGTCACTTCTTCTCTGCCTGCTGCTGCAGGAACCTACTCAAGCAATCAAACAGTCCTATATTGTATACTTAGGATCACATTCTTTTGGGCCAAATCCTTCATCAATTGATGTTGAATCTGTCACCAACTCTCATTATGATTTACTTGGATCTTACCTTGGAAGCACCGAAATGGCCAAAGATGCAATCTTTTACTCTTATAATAGATATATCAATGGCTTTGCTGCGGTACTTGAAGAAGATGAAGCAGAACAGATTGCGAATCATCCGGATGTAGTGTCCATTTTCTTAAATAAACGACGAAAATTGCATACAACTCACTCATGGGATTTCCTTGAATTAGAGAGAAATGGTGCAATTACAAAGCCCTCAATATGGAAGCAGTCACAAGGGGAAGACATCATTATTGGAAATTTAGACACTGGTGTATGGCCTGAATCCAAGAGCTTTAGTGATGAAGGGATGGGGCCAGTACCAAAAAAATGGCGTGGAATCTGTCAAATTGATAATAAGAATCAAGATAATTTTCACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTCACGAAGGTTTTCAAGCATCTGGGGGCAAACTGAACACATCGTTTAATAGTGCACGTGACACTGAAGGTCATGGTTCACACACATTATCAACTGCTGGTGGAAATTTTGTCTCTGGAGCAAGTGTTTTTGGCATTGGCAATGGAACAGCAAGTGGTGGATCACCAAAAGCACGTGTTGCATCCTATAAGGTCTGCTGGCCAAGCACCACCGATGGTGGCTGTGCTGATGCAGACATTTTGGCAGCTTTTGAAGCTGCAATTGGTGATGGTGTTGATGTGCTTTCCTATTCTTTGGGCTTAGATCAACCCTTTGAGTTTTATGAAACTGGTACTTCCTTAGGTTCTGGAGGAAATACAGGACCTGCTGCTAAATCTGTACAGAACTTGGAACCCTGGGTTCTCACTGTTGCTGCAAGCACAATAGACAGAGATTTCACTACTTTTGTTACTCTTTGTAACCAGAAAATCATCAAGGGAGTTAGTCTTTCTGAGTCTGGATTACCACCGAACAGTTTCTACGCATTGGTGAGTGCTGCTGATGCCAAAGCTGATAATGCATCTGCTAATGATGCCCTTCTTTGCAAGAAAGGAGCTCTTGATCCAGAGAAGGCGAAGGGGAAAATATTGGTGTGTCTTCGTGGTGATAATGATAGAGCTGACAAGGGTGTGCAAGCTGCAAATGCAGGCGCTGTTGGAATGATTTTGGCTAATGACAAGGAATCAGCGAATGAAATTATAGCTGACCCTCATGTGCTTCCTGCATCACATGTTACCTTTAATGATGGCAATTACATTTTAAATTACATCAACAACACCAAGTCTCCTGCGGCTTCCATTTCTGGAGTGAAAACAGAATTGGGTGTAAAGCCATCTCCATTTGTGGCTGCATTTTCATCAAGGGGCCCAAATGCCCTTGAGCCAGCAATTCTCAAGCCTGATGTCATAGCACCAGGAGTGGACATTATTGCTGCTTATACAGAAGCCACATCTCCAACAGAAGAAGAATCTGATAAACGAAGAACACCTTTCTTGAGTATGTCAGGCACTTCAATGTCATGTCCTCATGTTTCTGGCCTTGTTGGGCTGCTCAAATCTCTTCATCCTGATTGGAGTCCAGCGGCTATTAAGTCAGCAATCATGACTACAGCAAAAACAAAGGATAATTCTGGAAGGCCAATGTTGGATTCCTCACAGAATGAGGCAACTTCATTTGACTATGGTTCAGGGCACATTCACCCTAATCGTGCCGCGGACCCTGGACTTGTGTATGACCTAAATACAACTGATTATTTGAACTTTTTGTGTGGTCGTGGCTACAACAATTTCAATTATCCAGCAATTGTTATTCCTAAATTTGACGGTGGAAACTCCATGAATGTTACTCGTACTCTTACCAATGTTGGATCCCCAAGCACATATAGAGTGCGCATCAAGGCCCATCCAGATATTCAAGTTTTAGTTGAGCCCAACATATTATGCTTTCAGGAAAAGGGTGAGAGAAAGGAGTTCAGAGTTACATTGACCTTGAACCCTCAGCATAAGGCTGATTATGTCTTTTCTTATATTGTATACTTAGGATCACATTCTTTTGGTCCAAATCCTTCATCAGTTGATGTTGAATCTGTCACAAACTCTCACTATGAATTACTTGGATCTTATGTTGGAAGCATTGAGAAGGCCAAAGATGCAATCTTTTACTCTTATAATAGATATATTAATGGCTTTGCTGCTGTACTTGATGAAGATGAAGCAGAAAATATTGCAAAACATCCTGATGTAGTATCAGTTTTCTTAAACAAAGCACAAAAGATGCACACAACTCATTCATGGGATTTCCTTGAATTAGAGAGAAATGGTGTAATTGCAAAGCCTTCAATATGGAGGAAGTCACAAGGGGAAGATATCATTATTGGAAATTTAGACTCTGGTGTTTGGCCGGAATCCAAGAGCTTCAGTGATGAAGGAATAGGGCCAGTACCAAAAAAGTGGCGTGGAATCTGTCAAACTGATGATAAGAATCAAGATAATTTTCACTGCAACAGGAAGCTTATTGGAGCAAGGTATTTCTACAAAGGTTTCGAGGCAGAAAATGGCAAAATTTTATCGTTTTACAGTGCACGTGACTATGAAGGTCATGGTTCTCACACTTTATCAACTGCTGGTGGTAATTTTGTTTCTGGAGTGAGTGTTTTTGGCAATGGCAATGGAACAGCAAGTGGTGGATCACCAAAAGCCAGAGTTGTAGCCTGTGTATGCTATTATGCAGACATTTTGGCTGCTTTTGAAGCTGCCATAGGTGATGGTGTTGATGTGCTTTCCTTTTCTGTGGGTGGGTCCTTCCATGCAGTTGCCAATGGAATAGTTGTTGTCAGTTCTGGTGGAAATGCAGGACCTGCAGCTGAATCTATAGAGAACTTGGAACCCTGGGTGATCACTGTTGCTGCAAGCACAATAGACAGAGAATTCACTAGTTATGTTACACTTGGGAACAAGAAAATCATCAAGGGGTATAGTTTTTCAGAGTCAAGCCTACCATCAAATAGTTTCTACCCTTTGATAAGTGCTGCTGATGCCAAAGCTGATAATGCAACTGCCAAAGCTGCAACTGATAAGGGTGTGCAAGTTGCACGTGCAGGTGCTGTTGGAATGATTTTGGCTAATGACCAGGAATCAGGGAATGACATTACAGCTGACCCTCAAGTGCTTCCTGCATCACTTGTTACCTTTAATGATGCCACTTACATTTTTAATTACATCAAAAGCACCAAGTCTGTTGTGGCTTACATTTCTGGAGTGAAAACAGAATTGGGTATAAAGCCATCTCCATTTGTGGCTGAATTTTCATCAAGGGGCCCAAATCCCCTTGAGCCAACAATTCTCAAGCCTGACATAACTGCACCAGGAGTCAACATAATTGCTGCTTATTCTGAAGCTACATCTCCAGCAGAACAGGCATATGATACAAGAAGAACACCTTTCATGATTATGTCAGGCACTTCAATGTCATGTCCTCATGTTTCTGGCATTGTTGGACTCCTCAAATCTCTTCATCCAGATTGGAGTCCAGCTGCTATTAAGTCAGCAATCATGACAACAGCAAGAACAAAAGATAACTCTGGAAGACCTATGTTGGATGCATCACATAATAAGGCAAATCCATTTGCCTATGGTGCTGGGCACATTCATCCTAATCGTGCCGCGGACCCTGGACTTGTATATGATCTAAATACAACTGATTATTTGAACTTTTTATGTGGTCGTGGCTACAACAGTTCCCAACTTAAGATGTTTTATGGCAAGCCATACACATGTCCAAAGTCATTCAATTTAGTAGATTTCAATTATCCAGCAATCGTTATTCCTAAATTTGATAAAGGACATTCAATAAATGTTACTCGTACTCTTACTAATGTTGGGCCTCCAAGTACATATAGAGTGCGCATCAATGCACCTCCACAAGTTCAAGCTTTAGTTGAGCCCAACACACTAAGCTTTAAGGAAAAGGGAGAGAAAATGGAGTTTAGATCCTATATTGTATACTTAGGTTCACATTCTTTTGGTCCAAATCCTACATCAGTTGATGTTGAATCTGTAACGAAATCTCACTATGATTTACTTGGATCTTTCATTGGAAGCTCTGAGAAGGCCAAAGAAGCAATCTTTTACTCTTATAATAGATATATTAATGGTTTTGCTGCAGTACTTGATGATGATGAAGTAGAAAAGATTGCAAAGCATCCCAATGTAGTATCAGTTTTCTTAAACAAAGTACGAAAACTGCACACAACTCACTCATGGGATTTCCTTGGATTAGAGAGAAATGGTGTAATTGCAAATTCCTCAATATGGAAGAAGTCACAAGGCGAAGATATCATTATTGCAAATTTAGACACTGGTGTATGGCCTGAATCCAAGAGCTTTAGTGATGAAGGGATAGGGCCAATCCCAAAAAAGTGGCGTGGAATCTGTCAAACTGGTGATAAGAATCAAGATAATTTTCATTGCAACAGGAAGCTCATTGGAGCAAGATATTTTAACAAAGGTTTGAACGCAGCTGGTGCCAAAGACCTAATTACTTCATTTAATAGTGCACGTGACACTGATGGTCATGGCTCACACACATTATCAACTGCTGGTGGTAATTTTGTTCCTGGAGCAAGTGTTCTTGGCAATGGCAATGGAACAGCAAGTGGTGGATCACCAAAAGCCAGAGTTGCAGCGGGTGGATGTAGTGATGCAGACATTATGGCTGCTTTTGATGCTGCCATAGCTGATGGTGTTGATGTCATATCAGTGTCTCTAGGCTCTGATGAACCCTCTGAATTTTTTGAAAGTGCTATTTCCATAGGGTCCTTCCATGCAGTTGCCAACGGCATAAGTGTAGTGTGTTCAGCAGGAAATTCAGGACCTTCTCCTGGAACTGTAGCCAACATGGAATCATGGGTGCTCACAGTTGCTGCAAGCACAATTGATAGAGACTTTGCCAATTATATCACACTTGGTGACAAGAAAATTCTCAAGGGAAAAAGCCTTTCTGAGTCTGGCTTACCATCTAATAAGTTGTACCCGTTGGTCAGTGGTGCTGATGTCAAAGTTGACAATGCATCTTTCATAGATGATAGACTTGAGAAGGGTGTGCAAGCTGCAAATGCAGGTGCTGTTGGAATGATTTTGGCCAATGACAAGGAATCAGCGGATGAAATTATAGCTGACCTTCATGTGCTTCCTGCATCACATGTTACCTTTAAGGATGGCAGTTACATTTTAAATTACATCAACAACACCAAGTCTGCTGTGGCTCACATTTCTGAAGTGAAAACAGAATTTGGTATAAAACCATCTCCATTTGTGATTGGATTTTCATCAAGGGGCCCAAATTTCCTTGAGCCAGCAATCCTCAAGCCTGACATAACCGCACCAGGAGTTAACATTATTGCTGCAAATACTGAAGCCATACCTCCAACAGAACTACCATCTGACAAACGTAGAGTTCCTTTCAAGATTTTGTCAGGCACTTCAATGTCATGTCCTCATGTTGCTGGCATTGTTGGGCTGCTCAAATCTCTTCATCCAGATTGGAGTTCAGCTGCTATTAAGTCAGCAATCATGACCACAGCAAGAACAAAAGATAACACCGGAAGGCCTATTATGGATTCAAATTCATCACTGGAGGAGGGAACTCCATTTGCCTATGGTTCAGGGCACATTGACCCTAATCGTGCTGCAGATCCTGGACTTGTATATGACCTAAATATTACTGATTACTTGAACATTTTGTGTGGTCGTGGCTACAATAGTTCCCAGCTGAAGTTGTTCTACGGAAAGCCTTTCACTTGTCCAAAGTTGTTCAATATAGCAGATTTCAACTATCCATCTATCACAGTTTCTCAGCTTGACAATGGACATTCTCTGAATGTTTCTCGTACTCTTACCAATGTTGGACCCCCAAGCACGTATAGTGTGGTCATCAAAGCACCTCCAGAAGTTCTAGTATCAGTGGAGCCTAAAGTACTAAGCTTTAAGGAAAAGGGTGAAAAAAGGGAATTCAGAGTTACATTTACTTTGAAGCCACTAAGTAAGTCTAATAAGACTGATTATTTATTCGGAAGGTTGATTTGGACAGATGGCAAGCACCGTGTTGGAACACCTATTGTAGTTAAGTATCCACATTAG 6264 0.4116 MSLSICHVLLSLLLCLLLQEPTQAIKQSYIVYLGSHSFGPNPSSIDVESVTNSHYDLLGSYLGSTEMAKDAIFYSYNRYINGFAAVLEEDEAEQIANHPDVVSIFLNKRRKLHTTHSWDFLELERNGAITKPSIWKQSQGEDIIIGNLDTGVWPESKSFSDEGMGPVPKKWRGICQIDNKNQDNFHCNRKLIGARYFHEGFQASGGKLNTSFNSARDTEGHGSHTLSTAGGNFVSGASVFGIGNGTASGGSPKARVASYKVCWPSTTDGGCADADILAAFEAAIGDGVDVLSYSLGLDQPFEFYETGTSLGSGGNTGPAAKSVQNLEPWVLTVAASTIDRDFTTFVTLCNQKIIKGVSLSESGLPPNSFYALVSAADAKADNASANDALLCKKGALDPEKAKGKILVCLRGDNDRADKGVQAANAGAVGMILANDKESANEIIADPHVLPASHVTFNDGNYILNYINNTKSPAASISGVKTELGVKPSPFVAAFSSRGPNALEPAILKPDVIAPGVDIIAAYTEATSPTEEESDKRRTPFLSMSGTSMSCPHVSGLVGLLKSLHPDWSPAAIKSAIMTTAKTKDNSGRPMLDSSQNEATSFDYGSGHIHPNRAADPGLVYDLNTTDYLNFLCGRGYNNFNYPAIVIPKFDGGNSMNVTRTLTNVGSPSTYRVRIKAHPDIQVLVEPNILCFQEKGERKEFRVTLTLNPQHKADYVFSYIVYLGSHSFGPNPSSVDVESVTNSHYELLGSYVGSIEKAKDAIFYSYNRYINGFAAVLDEDEAENIAKHPDVVSVFLNKAQKMHTTHSWDFLELERNGVIAKPSIWRKSQGEDIIIGNLDSGVWPESKSFSDEGIGPVPKKWRGICQTDDKNQDNFHCNRKLIGARYFYKGFEAENGKILSFYSARDYEGHGSHTLSTAGGNFVSGVSVFGNGNGTASGGSPKARVVACVCYYADILAAFEAAIGDGVDVLSFSVGGSFHAVANGIVVVSSGGNAGPAAESIENLEPWVITVAASTIDREFTSYVTLGNKKIIKGYSFSESSLPSNSFYPLISAADAKADNATAKAATDKGVQVARAGAVGMILANDQESGNDITADPQVLPASLVTFNDATYIFNYIKSTKSVVAYISGVKTELGIKPSPFVAEFSSRGPNPLEPTILKPDITAPGVNIIAAYSEATSPAEQAYDTRRTPFMIMSGTSMSCPHVSGIVGLLKSLHPDWSPAAIKSAIMTTARTKDNSGRPMLDASHNKANPFAYGAGHIHPNRAADPGLVYDLNTTDYLNFLCGRGYNSSQLKMFYGKPYTCPKSFNLVDFNYPAIVIPKFDKGHSINVTRTLTNVGPPSTYRVRINAPPQVQALVEPNTLSFKEKGEKMEFRSYIVYLGSHSFGPNPTSVDVESVTKSHYDLLGSFIGSSEKAKEAIFYSYNRYINGFAAVLDDDEVEKIAKHPNVVSVFLNKVRKLHTTHSWDFLGLERNGVIANSSIWKKSQGEDIIIANLDTGVWPESKSFSDEGIGPIPKKWRGICQTGDKNQDNFHCNRKLIGARYFNKGLNAAGAKDLITSFNSARDTDGHGSHTLSTAGGNFVPGASVLGNGNGTASGGSPKARVAAGGCSDADIMAAFDAAIADGVDVISVSLGSDEPSEFFESAISIGSFHAVANGISVVCSAGNSGPSPGTVANMESWVLTVAASTIDRDFANYITLGDKKILKGKSLSESGLPSNKLYPLVSGADVKVDNASFIDDRLEKGVQAANAGAVGMILANDKESADEIIADLHVLPASHVTFKDGSYILNYINNTKSAVAHISEVKTEFGIKPSPFVIGFSSRGPNFLEPAILKPDITAPGVNIIAANTEAIPPTELPSDKRRVPFKILSGTSMSCPHVAGIVGLLKSLHPDWSSAAIKSAIMTTARTKDNTGRPIMDSNSSLEEGTPFAYGSGHIDPNRAADPGLVYDLNITDYLNILCGRGYNSSQLKLFYGKPFTCPKLFNIADFNYPSITVSQLDNGHSLNVSRTLTNVGPPSTYSVVIKAPPEVLVSVEPKVLSFKEKGEKREFRVTFTLKPLSKSNKTDYLFGRLIWTDGKHRVGTPIVVKYPH. 2088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01746 2087 ProSitePatterns Serine proteases, subtilase family, serine active site. 1868 1878 IPR023828 -
Seca12g01746 2087 Gene3D Peptidase S8/S53 domain 142 627 IPR036852 GO:0004252|GO:0006508
Seca12g01746 2087 SUPERFAMILY Subtilisin-like 801 1268 IPR036852 GO:0004252|GO:0006508
Seca12g01746 2087 CDD Peptidases_S8_3 799 1230 IPR034197 -
Seca12g01746 2087 Gene3D - 1956 2085 - -
Seca12g01746 2087 Gene3D Peptidase S8/S53 domain 831 1277 IPR036852 GO:0004252|GO:0006508
Seca12g01746 2087 FunFam Subtilisin-like protease SBT1.5 1487 1698 - -
Seca12g01746 2087 FunFam Subtilisin-like protease SBT5.3 707 802 - -
Seca12g01746 2087 ProSiteProfiles Serine proteases, subtilase domain profile. 1462 1939 - -
Seca12g01746 2087 SUPERFAMILY PA domain 398 471 IPR046450 -
Seca12g01746 2087 CDD Peptidases_S8_3 1456 1903 IPR034197 -
Seca12g01746 2087 Gene3D Peptidase S8/S53 domain 1487 1952 IPR036852 GO:0004252|GO:0006508
Seca12g01746 2087 Gene3D - 339 483 - -
Seca12g01746 2087 Gene3D - 1688 1806 - -
Seca12g01746 2087 Gene3D - 1016 1133 - -
Seca12g01746 2087 ProSitePatterns Serine proteases, subtilase family, serine active site. 1195 1205 IPR023828 -
Seca12g01746 2087 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Seca12g01746 2087 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1374 2083 IPR045051 -
Seca12g01746 2087 FunFam Subtilisin-like protease SBT5.3 18 113 - -
Seca12g01746 2087 FunFam subtilisin-like protease SBT1.5 339 483 - -
Seca12g01746 2087 ProSiteProfiles Serine proteases, subtilase domain profile. 806 1264 - -
Seca12g01746 2087 Pfam Fibronectin type-III domain 1984 2083 IPR041469 -
Seca12g01746 2087 Pfam Fibronectin type-III domain 1309 1372 IPR041469 -
Seca12g01746 2087 Pfam Fibronectin type-III domain 638 721 IPR041469 -
Seca12g01746 2087 CDD PA_subtilisin_like 1694 1799 - -
Seca12g01746 2087 Pfam Subtilase family 140 591 IPR000209 GO:0006508|GO:0008236
Seca12g01746 2087 SUPERFAMILY Subtilisin-like 1457 1943 IPR036852 GO:0004252|GO:0006508
Seca12g01746 2087 CDD PA_subtilisin_like 1022 1126 - -
Seca12g01746 2087 ProSiteProfiles Serine proteases, subtilase domain profile. 117 614 - -
Seca12g01746 2087 FunFam Subtilisin-like protease SBT1.5 1956 2086 - -
Seca12g01746 2087 SUPERFAMILY Subtilisin-like 112 618 IPR036852 GO:0004252|GO:0006508
Seca12g01746 2087 PRINTS Subtilisin serine protease family (S8) signature 1563 1576 IPR015500 -
Seca12g01746 2087 PRINTS Subtilisin serine protease family (S8) signature 1867 1883 IPR015500 -
Seca12g01746 2087 PRINTS Subtilisin serine protease family (S8) signature 1485 1504 IPR015500 -
Seca12g01746 2087 CDD Peptidases_S8_3 111 580 IPR034197 -
Seca12g01746 2087 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 113 IPR037045 -
Seca12g01746 2087 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1358 1458 IPR037045 -
Seca12g01746 2087 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 705 802 IPR037045 -
Seca12g01746 2087 FunFam Subtilisin-like protease SBT5.3 1363 1458 - -
Seca12g01746 2087 Pfam Subtilase family 1485 1930 IPR000209 GO:0006508|GO:0008236
Seca12g01746 2087 Pfam Subtilase family 829 1255 IPR000209 GO:0006508|GO:0008236
Seca12g01746 2087 Pfam Peptidase inhibitor I9 717 799 IPR010259 -
Seca12g01746 2087 Pfam Peptidase inhibitor I9 1373 1458 IPR010259 -
Seca12g01746 2087 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Seca12g01746 2087 CDD PA_subtilisin_like 346 476 - -
Seca12g01746 2087 Pfam PA domain 387 461 IPR003137 -
Seca12g01746 2087 Pfam PA domain 1737 1784 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01746 Seca-Chr12 19311931 19336275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01746 17 738 Subtilisin-like Serine Gene Family AT5G59810 55.863 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01746 - - vun:114175516 1793.86