Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01745 ATGAGAAAAACAATGTCTTCATCCATTGGTCATGCGTTATTATCACTTCTCCTCTGTCTTATGCTGCAGGAACCCACTCAAGCAATCAAACAGTCCTACATCGTGTACTTGGGATCACATTCTTTTGGTCCAACTCCTTCCTCAATTGATTTTGAATCCGTCACAAAGTCTCACTACGATTTGCTTGGAGCATATGTTGGAAGTACAGAGAAGGCCAAAGAAGCAATTTTTTACTCCTATAATAGATACATTAATGGTTTTGCTGCTGTACTTGATGAAGATGAAGCACAAAAGATTGCGAAGCATCCAAATGTAGTGTCCATTTTCTTAAACAAAGCTAGAAAACTGCACACAACTCACTCATGGAATTTCCTTGGATTAGAGGAAAATGGTGTAATTCCAGAGGCCTCAATATGGAGCACGTCACAGGGAGAAGATGTCATTATTGGGAATTTAGACACAGGTGTTTGGCCTGAATCCAAGAGTTTCAGTGAAGGAATGGGACCAGTCCCAACCAGGTGGCAAGGCATCTGTGAAACTGATGATGAGAATACAGATAACTTTCACTGCAACAGGAAGCTAATTGGAGCAAGATATTTTTACAAAGGTTTTAAGGAAGCTGTTGAGAAAGAACTAAATACTTCATTTAATAGTGCACGTGACACTGAAGGTCATGGCTCACACACATTATCAATTGCTGGTGGTAATTTTGTTTCTGGGGTGAGTGTATTTGGCCATGGCAATGGAACAGCAAGTGGTGGATCACCAAAAGCCAGAGTTGCAGCCTATAAGGTGTGTTGGCCAGTCACCTCTGGGGGTGGATGTAGTGATGCAGACATTTTGGCTGCTTTTGATGCTGCCATAGCTGATGGTGTTGATGTCATATCAGTGTCTCTAGGCTCTGATGAACCCTCTGAATTTTTTGAAAGTGGCATTTCCATAGGGTCCTTCCATGCAGTTGCCAATGGCATAATTGTAGTGAGCTCCGCAGGAAATTCAGGACCTTCTCCTGAAACTGTAGCCAACATGGAACCGTGGGTGCTCACAGTTGCTGCTAGCACAATGGATAGAGAGTTCACTAGTTATGTTACACTTGGTGACAAGAAAATTCTCAAGGGAGTTAGCCTTTCAGAGTTTGAATTGCCATCTCACGAGTTGTACCCATTGATAAGTGGTATTGATGCGGCAGCTGATTATGCAGATGCCATAAATGCCCTTTTTTGCCTGGATGGAGCTCTTGATCCAAACAAGGTGAAAGGAAAAATAGTGGTTTGTCTTCGAGGTGGAACTAAGAAGGGGGAGCAAGTTGCTCATGCAGGTGGTGTTGGAATGATTTTGGTTAATAATGAGGAAGGGAATGCAATTCTAGCTATTCCTCATGTGCTTCCTGCTTCACATGTTAACTTTTCTGATGGAATTTATATTTTTTCTTACATCCACCGCACCGAGTCTCCTCTGGCTTACATTTCTAGAGTGGAAACAGAATTGGGTAAAATACCAGCTCCATTTTTAGCTTCATTTTCATCAAGGGGTCCCAATATCCTTGAACCAACAATCCTCAAGCCTGACATAGTTGCACCAGGAGTTAACATCATTGCTGCTTATACTGAAGCCACATCTCCAATAGAAGAAGCATATGATACAAGAAGAAAAGGAACACCTTTCATGATTATGTCAGGCACTTCAATGTCATGTCCTCATGTTTCTGGCATTGTTGGACTGCTCAAATCTCTTCATCCAGGTTGGAGTCCAGCTGCTATTAAGTCAGCAATCATGACCACAGCAAGAATAAAAGATAATGCTGGAAGGACTATGCTGGATACATCACTGGATGAGGCAACTCCATTTGGCTATGGTGCAGGGCACATTCGACCTAATCGTGCTGTAGACCCTGGACTTGTTTATGATCTTGATACTATTGATTATTTGAACTTTTTATGTGATCGTGGCTACAGCATTACTCAGCTTACTGTGTTCTATGGAAAGCCTTACACATGTCCAGAGTCATTTAGTTTAGTAGATTTCAACTATCCAGCAATCACAATTCCTAACTTTGATAATAAACATTCTATAAATGTTACTCGTACTCTTACTAATGTTGGGCCCCCAAGCACATATAGAGTGCTCATAAAAGCACCTCCAGAAGTTTTAGTTTTAGTTGAGCCCAACATACTAAGCTTTAAGGAAATTGGTGACAAAAGGGAGTTTAGAGTTACATTGACATTGAACCCGTTAATTAAGAACAAGGATGATTACGTCTTTGGGAGGTTGGATTGGACTGATGGCAAGCACCATGTTAGGAGTCCTATTGTAATTATGTATTGA 2325 0.4133 MRKTMSSSIGHALLSLLLCLMLQEPTQAIKQSYIVYLGSHSFGPTPSSIDFESVTKSHYDLLGAYVGSTEKAKEAIFYSYNRYINGFAAVLDEDEAQKIAKHPNVVSIFLNKARKLHTTHSWNFLGLEENGVIPEASIWSTSQGEDVIIGNLDTGVWPESKSFSEGMGPVPTRWQGICETDDENTDNFHCNRKLIGARYFYKGFKEAVEKELNTSFNSARDTEGHGSHTLSIAGGNFVSGVSVFGHGNGTASGGSPKARVAAYKVCWPVTSGGGCSDADILAAFDAAIADGVDVISVSLGSDEPSEFFESGISIGSFHAVANGIIVVSSAGNSGPSPETVANMEPWVLTVAASTMDREFTSYVTLGDKKILKGVSLSEFELPSHELYPLISGIDAAADYADAINALFCLDGALDPNKVKGKIVVCLRGGTKKGEQVAHAGGVGMILVNNEEGNAILAIPHVLPASHVNFSDGIYIFSYIHRTESPLAYISRVETELGKIPAPFLASFSSRGPNILEPTILKPDIVAPGVNIIAAYTEATSPIEEAYDTRRKGTPFMIMSGTSMSCPHVSGIVGLLKSLHPGWSPAAIKSAIMTTARIKDNAGRTMLDTSLDEATPFGYGAGHIRPNRAVDPGLVYDLDTIDYLNFLCDRGYSITQLTVFYGKPYTCPESFSLVDFNYPAITIPNFDNKHSINVTRTLTNVGPPSTYRVLIKAPPEVLVLVEPNILSFKEIGDKREFRVTLTLNPLIKNKDDYVFGRLDWTDGKHHVRSPIVIMY. 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01745 774 CDD Peptidases_S8_3 115 595 IPR034197 -
Seca12g01745 774 Pfam PA domain 400 472 IPR003137 -
Seca12g01745 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 117 IPR037045 -
Seca12g01745 774 FunFam Subtilisin-like protease SBT1.5 146 367 - -
Seca12g01745 774 Pfam Subtilase family 144 621 IPR000209 GO:0006508|GO:0008236
Seca12g01745 774 Gene3D - 356 496 - -
Seca12g01745 774 Pfam Fibronectin type-III domain 674 772 IPR041469 -
Seca12g01745 774 FunFam Subtilisin-like protease SBT5.3 21 117 - -
Seca12g01745 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Seca12g01745 774 FunFam Subtilisin-like protease SBT1.5 646 774 - -
Seca12g01745 774 Pfam Peptidase inhibitor I9 32 117 IPR010259 -
Seca12g01745 774 ProSiteProfiles Serine proteases, subtilase domain profile. 121 629 - -
Seca12g01745 774 Gene3D Peptidase S8/S53 domain 146 642 IPR036852 GO:0004252|GO:0006508
Seca12g01745 774 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Seca12g01745 774 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Seca12g01745 774 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Seca12g01745 774 CDD PA_subtilisin_like 362 489 - -
Seca12g01745 774 Gene3D - 646 773 - -
Seca12g01745 774 FunFam subtilisin-like protease SBT1.5 356 496 - -
Seca12g01745 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 771 IPR045051 -
Seca12g01745 774 SUPERFAMILY Subtilisin-like 116 633 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01745 Seca-Chr12 19292949 19299644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01745 21 773 Subtilisin-like Serine Gene Family AT5G59810 57.237 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01745 - - vun:114175516 987.638