Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01743 ATGGCCACCACGACCACCAGTCTCGGCGGCGACGCCGGCGGAGACGACCGTGTCCTCGCGACGGCTCAGCAGATCTTGAAGAGCCTGAGAACTCCCAAAGAGGATCGCGAAGACATGCTCTTGATCTTCTCCACCTTCGATAACCGCCTCTCCGGCATCTCTGACCTCATCAACGGCGAGGATTCCAAGTCCTCCACCGACGAAGACCTCGACCGCTTTGAAGCCGCCGAGAAAGTCATCCTCGTCGACGCTTCTCTCTCCGGTGAACCTTCCCGCCAATCCATCTCACTCTTCGATCCTCCCAACGACCCTGTCGAGTACTTCTCCGCCGTCGACGAGATCATCCAGTGGATGGAGCAATTATCGATCGCGTCCTCTGCCGGAAAACACGGCCAGACCATCGCGGACCGTGCTGAGAACGCGATCCAGCTCGCTATGTCGAGGCTCGAGGACGAGCTTCGCCACGTTCTGATTTGCAACACCGTCCCTCCCGATGCCGTGAGCCGCTACGGTTCGAACCGGAGGAGTTCCATCTCGTTCAGTTCGCACGACGGTGCGATCGATGAGAATCTCGAGAGTTTCGGTGATGTCAGCGATCGTGGTTCTTATCGGTTCCACGAGCGCGGTTCAAGCCTGGGAGACGATTTGTTCATCGATTTGGTTCGTCCCGAAGCGATGCTGAACCTCAAAGAGATCATTGATCGTATGGTTAGGTCTGGTTACGAAAGGGAGTGCCTTCAGGTTTATAGCAGTGTCCGTCGTGACGCTTTGGATGAGTGTTTGCTTATTCTCGGTGTTGAGAAGTTGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAAGAGTTTGGATGAGAAAATGAAGAATTGGGTGCAAGCAGTTAAGGTTATTGTTGGGGTTCTGTTGACTGGGGAGAAGAGGTTGTGTGATAATTTGTTTGGTGAATTAGATGAGTTGAAGGAGATTTGTTTCAATGAGACTGCGAAAGGGTGTGTTATGCAGTTGTTGAATTTTGGTGAGGCCATTGCCATTTGTAAGAGGTCACCGGAGAAGTTGTTTAAGATATTGGATATGTATGAGGCTTTGAGGGATGCTTTGCCTGATTTGGAGGATATGGTTTCCGATGGGTTTGTGATCACTGAGGCCAAGGGAGTGCTGAGGGGACTTGGTGAGGCTGCAAAAGGAACATTTGCTGAGTTTGAGAATTGTATTCGAAATGAGACTTCCAAAAAGCCAGTCATCACTGGGGATGTTCATCCTTTGCTTCGTTATGTCATGAATTACCTCAAATTGCTTGTGGATTATGGTGACCCTATGGATTCCCTTTTGGAAATAAGTGAAGAGGATCTTTACCATTTTCAAAATGATTTGGGTGGTGATGGTTCGCAGTTAGAGGCTATGTCCCCCTTAGGACGTCAAATACTGTTGCTAATGTCTGAGCTTGAGTACAATCTTCAGGAAAAATCAAAGCTTTATGAAGACAGTGCAATGCAGCAGGTGTTTTTGATGAACAATCTCTATTACCTAGTGCGGAAAGTGAAAGACTCAGATCTTAGAACAGTCTTGGGGGATGATTGGATTCGTAAACGCCGCGGCCAGGTACGCCAGTATGCAACAGGCTATCTCAGAGCCTCTTGGAGCAAGGCCTTGGCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAGTAATGCATCAAAGATGGCTTTGAAAGAGAGGTTCAAGAGTTTCAATGCATGTTTTGAAGAAATATACAGGACTCAGACAGCTTGGAAGGTACCAGATGATCAGCTTAGGGAAGAGATGCGAATATCTATATCAGAGAAGGTGATCCCTGCATACCGCTCGTTTGTGGGGAGGTTTAGGAGTCAGCTAGAAGGAAGGCATTTGGGGAAATACATTAAGTATACACCAGAGGATCTAGAGACCTATTTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGAAAGAGTACATAG 1992 0.4819 MATTTTSLGGDAGGDDRVLATAQQILKSLRTPKEDREDMLLIFSTFDNRLSGISDLINGEDSKSSTDEDLDRFEAAEKVILVDASLSGEPSRQSISLFDPPNDPVEYFSAVDEIIQWMEQLSIASSAGKHGQTIADRAENAIQLAMSRLEDELRHVLICNTVPPDAVSRYGSNRRSSISFSSHDGAIDENLESFGDVSDRGSYRFHERGSSLGDDLFIDLVRPEAMLNLKEIIDRMVRSGYERECLQVYSSVRRDALDECLLILGVEKLSIEEVQKVEWKSLDEKMKNWVQAVKVIVGVLLTGEKRLCDNLFGELDELKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFKILDMYEALRDALPDLEDMVSDGFVITEAKGVLRGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLLRYVMNYLKLLVDYGDPMDSLLEISEEDLYHFQNDLGGDGSQLEAMSPLGRQILLLMSELEYNLQEKSKLYEDSAMQQVFLMNNLYYLVRKVKDSDLRTVLGDDWIRKRRGQVRQYATGYLRASWSKALACLKDEGIGGSSSNASKMALKERFKSFNACFEEIYRTQTAWKVPDDQLREEMRISISEKVIPAYRSFVGRFRSQLEGRHLGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST. 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01743 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 70 650 IPR004140 GO:0000145|GO:0006887
Seca12g01743 663 SUPERFAMILY Cullin repeat-like 95 649 IPR016159 -
Seca12g01743 663 FunFam Exocyst subunit Exo70 family protein 91 656 - -
Seca12g01743 663 Gene3D Exocyst complex component Exo70 91 655 - -
Seca12g01743 663 Pfam Exo70 exocyst complex subunit 287 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01743 Seca-Chr12 19239668 19241659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01743 16 662 EXO70 exocyst subunit family AT5G50380 60.296 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01743 K07195 - gmx:100809716 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01743 12 19239668 19241659 Seca12g01743 12 19239668 19241659 ECH