Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01683 ATGATGAAGGTCACAACAAATTTTTCAAGTTTCGTGATCTTAATACTTTGTTTTCAAGAATTCGTCCACGTTTCTTCGTCGCCTCTCGGAAACCAGGTTTATGAGGAATCGTCTGGTGAAAGAAATCTTAAGCAAGAACAAGAGCATGGTCATGAAGTGCATTGCTCTAGAGAGAGAAGTAGGGCAGCTTGGAAAATAATAGAGGAGTATTTGATACCATTTGTGGAAAAAGAAAACTATCAGCTTTCAAGAAGGTGCAGACTTCACCCTGAGAATGATATATTCAGGGATCAGGAAGAGCATAAAATTTCCATAGACAGAAATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTCCGTGAAGAAAAATTTCTCGATCAGCATTTTGATAACAGACACCACAATCTTCTGAATCTAAGTCATGGTAAGTGCTTGGCTGATTTATGCGGGGCATTGCATTGTGATGCTGTGATGAATTCCAAGTCCTCTAGAAGCAAGTGTAACCCAGCAGCTGCTGCAAGAAACCGTCACCTATGTGAGAGTCTTGCTGATGGTTGTTTTCCTATAAGCGAGGGTCCATCAGCAGGCCGTCTTCATGGTATACTTATATTTTCTTTTACAGTTAACTCCTTATTGTGCCACTATGATGTTTCTCGTCACTCCTTTCTTTTAAAAGAAAGTCTTTATTTTTTATATTTTGCTCTTTGTTGA 711 0.391 MMKVTTNFSSFVILILCFQEFVHVSSSPLGNQVYEESSGERNLKQEQEHGHEVHCSRERSRAAWKIIEEYLIPFVEKENYQLSRRCRLHPENDIFRDQEEHKISIDRNEWRCGYCKKSFREEKFLDQHFDNRHHNLLNLSHGKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADGCFPISEGPSAGRLHGILIFSFTVNSLLCHYDVSRHSFLLKESLYFLYFALC. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01683 236 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 133 IPR013087 -
Seca12g01683 236 PANTHER ZINC FINGER PROTEIN-RELATED 3 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01683 Seca-Chr12 18340450 18345446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01683 42 208 C2H2 Transcription Factor Family AT5G40710 66.667 2.49e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01683 - - lang:109362398 348.206