Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01679 ATGTCAGGTTCAAGACAAGGCCTTCCAGAATTCCAAATTGAAATAACAATTTTATCCAAAATTTGCCATCGCCACCTTGTTTCACTAGTTGGTTTTTGTGAAGAAAAATCAGAAATGATACTTGTGGTTGAAAATGGGTGA 141 0.3546 MSGSRQGLPEFQIEITILSKICHRHLVSLVGFCEEKSEMILVVENG. 47
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01679 46 SUPERFAMILY Protein kinase-like (PK-like) 4 44 IPR011009 -
Seca12g01679 46 PANTHER OS07G0166700 PROTEIN 4 45 IPR045272 GO:0004714|GO:0006468
Seca12g01679 46 Gene3D Phosphorylase Kinase; domain 1 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01679 Seca-Chr12 18315336 18315476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01679 2 44 Receptor kinase-like Gene Family AT2G23200 69.767 1.13e-15 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca12g01679 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01679 - - gmx:100797031 77.4109