Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01672 ATGGATTGGATTCCTAGAGTTGGTAAGGAATTTGATGATCATGAAGAAGCCTGGCACTTTTGGGTAGAATACAGTTCAAAAATGGGTTTTGGAGTTAGAAAAGATTACTTTAACAAAAGGAAGGAAGATGACTCCATTACATCTTGTAGATTCGTTTGTTGTAAGGAGGGGAAGAAGGACAAGAAGTCATCTTTGGTAAAAAAAAACCAGGGCTGA 216 0.375 MDWIPRVGKEFDDHEEAWHFWVEYSSKMGFGVRKDYFNKRKEDDSITSCRFVCCKEGKKDKKSSLVKKNQG. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01672 71 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 68 - -
Seca12g01672 71 Pfam FAR1 DNA-binding domain 20 68 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01672 Seca-Chr12 18256571 18256786 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g01672 FAR1 4.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01672 - - aprc:113870350 86.2705