Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01652 ATGCTACTCATTATCTTTTCCATCTTCCTTATCATATTCCTTCCTATCAAATGGTTTTCCAAGTACTCCACAAAACACAAAAACTCAATCCCTGCTCCTCCAAAACTCCCTATACTAGGAAATCTCCATCAACTAGGTGCGTTCCCTCACCGCACGCTCCAATCTTTGGCTAAAAAATATGGGCCCTTTATGCAGATCCATCTAGGGAGCATACCAGTTCTCGTGATTTCATCTGCTGAAGCCGCGCGTGAGGTAATGAAAACCCACGATCGCGTCTTCGCAAACAGGCCTCAAAGTAAATTCTATGACATACTCCTTTATGATTCAAAAGACGTTTCAGCAGCTCCGTATGGGGAATACTGGAGGCAGGTAAGGAGCATCTCTGTTTTACATCTTTTGAGTGTGAAAAGGGTTCAATCTCTCCGTGCCGTGAGAGAAGAGGAAGTTGCTGTAATGATGGAAAAGATAAGGCAATCTTCTTCTTCCTCGTTATCAGTGAATTTAAGTGAATTAATTGCTACAACTATCAATGATATAGTCTGTAGGGTGGCTTTGGGAAGAAAGTATGGTGGGGAAAATGGGAAGGGATTTAAACAGTTATTGATGGATTTTACAGAGTTACTTGGTACTTTTGTTGTTGGAGATTATGTGCCTTGGCTTGATTGGTTGAGCAGAGCTTCTGGAGTGTATGGAAGAGCAAACAGAGTGGCTAAGCAGTTTGATGAATTTTTGGAGGGAGTGGTTGAAGAGCATATCAATCGTCAGAAAGAAGCCAGTGGCAACGAGAATGGTGATTTTGTTGACGTTTTGCTTTGGATCCAGAGGACAGACGCAATTGGCTTTCCCATTGACAGAACGATCATAAAGGCTTTGATATTGGATATGTTTTCTGCAGGTACGGACACTATATCTACCTTTCTAGAATGGGCAATGACAGAACTCTTAAAGCATCCAAATATCATGAAAAAATTGCAAGATGAAGGTAGGAAAGTTGCTGGTAATAGAACACACATAACTGAAGAGGATTTGGGTCAGATGCAATACCTAAAGTCAGTGGTTAAAGAAACTCTACGGTTACATCCCCCAATTCCATTACTAGTCCCACGAGAAAGCATGCAGGATATCAAACTGAATGGCTACCACATTGAAGCTGGCACACGAGTAATGATCAATGCTTGGGCCATTGCAAGAGATCCTACATACTGGGATCAACCTGAAGAGTTCAAACCTGAGAGGTTCTTGAATAGTTCAATAGATGTCAGAGGGAATGATTTCCATTTGATCCCATTTGGAGCAGGGAGGAGGGGTTGCCCAGGGATAGCGTATGCTATGGTAGCCAATGAGCTTGTGCTAGCTAACCTTGTCCACCAATTTGATTGGTCATTACCTGGTGGAGCTAAGGAGGAGACCTTGGACATGTCTGAAACAGTTGGCTTAACCATGCATAGAAAGACTCCCCTTATGGCAGATGCAGCCCCAAAAAAGAATTGA 1491 0.4266 MLLIIFSIFLIIFLPIKWFSKYSTKHKNSIPAPPKLPILGNLHQLGAFPHRTLQSLAKKYGPFMQIHLGSIPVLVISSAEAAREVMKTHDRVFANRPQSKFYDILLYDSKDVSAAPYGEYWRQVRSISVLHLLSVKRVQSLRAVREEEVAVMMEKIRQSSSSSLSVNLSELIATTINDIVCRVALGRKYGGENGKGFKQLLMDFTELLGTFVVGDYVPWLDWLSRASGVYGRANRVAKQFDEFLEGVVEEHINRQKEASGNENGDFVDVLLWIQRTDAIGFPIDRTIIKALILDMFSAGTDTISTFLEWAMTELLKHPNIMKKLQDEGRKVAGNRTHITEEDLGQMQYLKSVVKETLRLHPPIPLLVPRESMQDIKLNGYHIEAGTRVMINAWAIARDPTYWDQPEEFKPERFLNSSIDVRGNDFHLIPFGAGRRGCPGIAYAMVANELVLANLVHQFDWSLPGGAKEETLDMSETVGLTMHRKTPLMADAAPKKN. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01652 496 SUPERFAMILY Cytochrome P450 30 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 CDD CYP71-like 59 487 - -
Seca12g01652 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PANTHER CYTOCHROME P450 71B11-RELATED 12 489 - -
Seca12g01652 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Seca12g01652 496 Pfam Cytochrome P450 31 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01652 496 FunFam Cytochrome P450 83B1 17 490 - -
Seca12g01652 496 Gene3D Cytochrome P450 19 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01652 Seca-Chr12 17884624 17888902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01652 25 492 Cytochrome P450 AT3G48270 54.158 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01652 - - gmx:100819183 633.254