Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g01608 | ATGTTGAAGGCAATGGTTAATCTAATAGTTGACTCCACAAATATAACACTAAAATCTTGGGAGACTAAACTAGAAAGTGAGGGAGTAGTTTCAGAGATTAAAGTTGATGATGATCTAAGAGGCTTGTCAGCTGACATGATTTCCAGAGCTTGTTTTGGGAGCAATTATATTGAAGGAAAAGAAATATTCACAAAGCTTAGAGATCTTCAAAAACTCCTTTCTAAGATATATGCTGGAATTCCAGGCTTTAGGGTGGAGCAGAGAAAGTTTTTATTTCAGCCCAGTAAATATCCCCCCATATTTGTGGTTAGTGTTAACGAAAAGGAAAGAGCGTGCCCTCTACATCTTGCAGAAGCTCTAGAATACTGCACAAGCAAAGGGCATGCCCTCTATCATGACCTTAATACATTGGGGCATTTGGCTCTGGCAAAAGCAAATCAGAGCTTGCTAGACTATCTTTGTTCAACCCCTCTTTGTCTCAAGTTCAGAATTTTCTTCAGCAAAAGCCCCAAGGTTGAGAAGATTTTTGGCCCAGGAAACCAATATGTCACAGCTGCAAAAATGATTCTGCAAAATAGTGAAGCTATGGATGCAATTGACATGCCAGCTGGTTCATCTGAAGTTTTGGTCATTGCAGATAAGCATGCAATTCCTCGTCATGTAGCTGCCGATTTGCTTTCCCAGGTTTACTGA | 693 | 0.4012 | MLKAMVNLIVDSTNITLKSWETKLESEGVVSEIKVDDDLRGLSADMISRACFGSNYIEGKEIFTKLRDLQKLLSKIYAGIPGFRVEQRKFLFQPSKYPPIFVVSVNEKERACPLHLAEALEYCTSKGHALYHDLNTLGHLALAKANQSLLDYLCSTPLCLKFRIFFSKSPKVEKIFGPGNQYVTAAKMILQNSEAMDAIDMPAGSSEVLVIADKHAIPRHVAADLLSQVY. | 231 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g01608 | 230 | PRINTS | Histidinol dehydrogenase signature | 199 | 220 | IPR012131 | GO:0016616|GO:0046872|GO:0051287 | |
Seca12g01608 | 230 | PRINTS | Histidinol dehydrogenase signature | 167 | 192 | IPR012131 | GO:0016616|GO:0046872|GO:0051287 | |
Seca12g01608 | 230 | PRINTS | Histidinol dehydrogenase signature | 221 | 230 | IPR012131 | GO:0016616|GO:0046872|GO:0051287 | |
Seca12g01608 | 230 | PANTHER | HISTIDINOL DEHYDROGENASE HDH | 169 | 228 | IPR012131 | GO:0016616|GO:0046872|GO:0051287 | |
Seca12g01608 | 230 | SUPERFAMILY | ALDH-like | 168 | 228 | IPR016161 | GO:0016491 | |
Seca12g01608 | 230 | Gene3D | Nitrogenase molybdenum iron protein domain | 188 | 229 | - | - | |
Seca12g01608 | 230 | Pfam | Histidinol dehydrogenase | 169 | 228 | IPR012131 | GO:0016616|GO:0046872|GO:0051287 | |
Seca12g01608 | 230 | Gene3D | - | 37 | 98 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g01608 | Seca-Chr12 | 17375245 | 17379585 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g01608 | 2 | 83 | Cytochrome P450 | AT5G24910 | 50.588 | 9.27e-18 | 79.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g01608 | - | - | gmx:100780335 | 144.821 |