Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01608 ATGTTGAAGGCAATGGTTAATCTAATAGTTGACTCCACAAATATAACACTAAAATCTTGGGAGACTAAACTAGAAAGTGAGGGAGTAGTTTCAGAGATTAAAGTTGATGATGATCTAAGAGGCTTGTCAGCTGACATGATTTCCAGAGCTTGTTTTGGGAGCAATTATATTGAAGGAAAAGAAATATTCACAAAGCTTAGAGATCTTCAAAAACTCCTTTCTAAGATATATGCTGGAATTCCAGGCTTTAGGGTGGAGCAGAGAAAGTTTTTATTTCAGCCCAGTAAATATCCCCCCATATTTGTGGTTAGTGTTAACGAAAAGGAAAGAGCGTGCCCTCTACATCTTGCAGAAGCTCTAGAATACTGCACAAGCAAAGGGCATGCCCTCTATCATGACCTTAATACATTGGGGCATTTGGCTCTGGCAAAAGCAAATCAGAGCTTGCTAGACTATCTTTGTTCAACCCCTCTTTGTCTCAAGTTCAGAATTTTCTTCAGCAAAAGCCCCAAGGTTGAGAAGATTTTTGGCCCAGGAAACCAATATGTCACAGCTGCAAAAATGATTCTGCAAAATAGTGAAGCTATGGATGCAATTGACATGCCAGCTGGTTCATCTGAAGTTTTGGTCATTGCAGATAAGCATGCAATTCCTCGTCATGTAGCTGCCGATTTGCTTTCCCAGGTTTACTGA 693 0.4012 MLKAMVNLIVDSTNITLKSWETKLESEGVVSEIKVDDDLRGLSADMISRACFGSNYIEGKEIFTKLRDLQKLLSKIYAGIPGFRVEQRKFLFQPSKYPPIFVVSVNEKERACPLHLAEALEYCTSKGHALYHDLNTLGHLALAKANQSLLDYLCSTPLCLKFRIFFSKSPKVEKIFGPGNQYVTAAKMILQNSEAMDAIDMPAGSSEVLVIADKHAIPRHVAADLLSQVY. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01608 230 PRINTS Histidinol dehydrogenase signature 199 220 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca12g01608 230 PRINTS Histidinol dehydrogenase signature 167 192 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca12g01608 230 PRINTS Histidinol dehydrogenase signature 221 230 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca12g01608 230 PANTHER HISTIDINOL DEHYDROGENASE HDH 169 228 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca12g01608 230 SUPERFAMILY ALDH-like 168 228 IPR016161 GO:0016491
Seca12g01608 230 Gene3D Nitrogenase molybdenum iron protein domain 188 229 - -
Seca12g01608 230 Pfam Histidinol dehydrogenase 169 228 IPR012131 GO:0016616|GO:0046872|GO:0051287
Seca12g01608 230 Gene3D - 37 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01608 Seca-Chr12 17375245 17379585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01608 2 83 Cytochrome P450 AT5G24910 50.588 9.27e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01608 - - gmx:100780335 144.821