Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01507 ATGCAGAATTGTGTATTCACCGGGATAAGCTACAGCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATCACGTTTGTCCTAGCGGTCATCTTCAGGATGGAAAATTTGGATATTGGAAGCTCAATAAGCCAGATCAAAATCGTGGGCACAGTGCTGTCAATATCGGGAGCTTTGCTCGTGACCCTTTATAAGGGCGCTCCCATTGGCAGCTTTCAAACTCAACCCTCTCCATCGCAACCAGTACCATATCTGTTGGCAGAAACCAGTAACTGGGCTGTTGGGGGCCTCTTCCTTGTCATTGCTTCTTTATCTCTTGCTGTCTGGAATATTGCTCAGGCAGCAATTCTGAAAGGATATCCATCTCAGTTGACCATAGTAGCCTTCTATATCCTGTTTGGAACAATCCAAAGTGCAATACTTTCTCTGATTGTAGTCAGAGATCCAAATGCCTGGAATCTAAATGCTGACATTGAGCTCATCTCCATATTCTACTCAGCTGTTTTCGGAAGTGTGGTGACATATTCAGTACTAACTTGGTGCATAAATAGGAAAGGACCTGTATTTGTTACCATGTTCAAGCCTGTGGGGATTGCAATTGCTGCCTTTATGAGTGCTGTCTTCCTTGGTGATACACTCCATGTTGGCAGTGTCATTGGAGCACTAGTAATCGCCATTGGATTTTACACGGTTGTGTGGGCACAATCCAAAGAAAGAAATGTGAAAGGCCTCGAAGTTGATAGACAATCATCCCCGTCTGCCCAAGCGAGTCCTCTACTAGAGTCACCATGA 801 0.4507 MQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFRMENLDIGSSISQIKIVGTVLSISGALLVTLYKGAPIGSFQTQPSPSQPVPYLLAETSNWAVGGLFLVIASLSLAVWNIAQAAILKGYPSQLTIVAFYILFGTIQSAILSLIVVRDPNAWNLNADIELISIFYSAVFGSVVTYSVLTWCINRKGPVFVTMFKPVGIAIAAFMSAVFLGDTLHVGSVIGALVIAIGFYTVVWAQSKERNVKGLEVDRQSSPSAQASPLLESP. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01507 266 Pfam EamA-like transporter family 98 235 IPR000620 GO:0016020
Seca12g01507 266 SUPERFAMILY Multidrug resistance efflux transporter EmrE 100 240 - -
Seca12g01507 266 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 68 - -
Seca12g01507 266 PANTHER WAT1-RELATED PROTEIN 2 250 IPR030184 GO:0016020|GO:0022857
Seca12g01507 266 MobiDBLite consensus disorder prediction 247 266 - -
Seca12g01507 266 MobiDBLite consensus disorder prediction 249 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01507 Seca-Chr12 15347460 15350956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01507 8 253 Nodulin-like Gene Family AT5G40240 46.586 1.31e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01507 - - psat:127073896 417.157