Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01469 ATGGTGTCCACATCTGAGAAGAAGAAAACCCTTCACTCCCTCATCGCTTCTAACCTCACCAACCTCACTATTCCTTCTTCTTCCACCAACGATCCTAACCCATCTCCTTCCACTGCCAGCCCCCACGTCATCCACAGTAGGTCCCACTCCTTCGTAGGTCCCTCCCCGCGCTTCCCCCCTCCCTCTTCCTCTTCCCTCTTCTTCCTCGACGAAGAATTCCCTTCCCACAGCAGCGACGACGAAGACGATGAACCCGAACCAGAAAAGCAAGAGAAGAAAGTGGTCCCCAAAATTGGCCCCGCGGATTTCCAGATTCTGAGAGTTGTAGGGCAGGGTGCCTTTGGTAAGGTCTTTCTGGTTAAAAAAAAGGGCGATTGTTCAAACGGTGACGGTGTCTTCGCCATGAAGGTCATGAGGAAGGACACCATCATAAAAAAGAATCACGTTGATTATATGAAAGCTGAAAGAGATATTCTCACTAAAGTTCTTCATCCTTTCATTGTTCAGCTCCGCTACTCTTTCCAAACCAAATCAAAGTTATATTTGATTTTGGACTTTATAAATGGAGGGCATCTCTTCTTTCACTTATACCGGCAGGGAATTTTCAGTGAGGATCAGGCAAGGATTTACACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAACGGCATCGTGCATCGGGATCTTAAACCTGAAAACATACTTATGGATGCTGATGGCCATGTGATGCTAACTGATTTTGGACTATCAAAAGAAATTGATGAATTGGGCAGATCCAACTCTTTGTGTGGGACCACCGAATATATGGCTCCAGAAATCCTTCTTGGTAAAGGACATAACAAGGATGCAGATTGGTGGAGTGTCGGTGTTCTGTTGTATGAAATGCTAACAGGGAAGGCACCATTTACACACACTAACAGAAAGAAGCTTCAGGAGAAAATTATTAAAGAGAAAGTTAAACTTCCACCACACCTTACCACTGAAGCTCACTCTTTGCTTAAAGGATTACTGCAAAAGGATCCGTCAACAAGGTTAGGCAGTGGGGCAAATGGAGAAGACCAGATCAAGAGTCATAAATGGTTTCGGTCCATGAATTGGAAAAAATTGGAGGCAAGAGAACTGGAACCAAAGTTTAAACCAGATGTGTCTGGAAGAGAGTGTACAGCTAATTTTGACCAATGCTGGACAGCAATGCCTCCTGATGACTCACCAGCAACCACTCCTACAGCAGGTGACCATTTCAAGGGCTATACTTATGTGGCACCAAACCCTTGGCTTTCCTCTGGATAG 1296 0.4506 MVSTSEKKKTLHSLIASNLTNLTIPSSSTNDPNPSPSTASPHVIHSRSHSFVGPSPRFPPPSSSSLFFLDEEFPSHSSDDEDDEPEPEKQEKKVVPKIGPADFQILRVVGQGAFGKVFLVKKKGDCSNGDGVFAMKVMRKDTIIKKNHVDYMKAERDILTKVLHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDADGHVMLTDFGLSKEIDELGRSNSLCGTTEYMAPEILLGKGHNKDADWWSVGVLLYEMLTGKAPFTHTNRKKLQEKIIKEKVKLPPHLTTEAHSLLKGLLQKDPSTRLGSGANGEDQIKSHKWFRSMNWKKLEARELEPKFKPDVSGRECTANFDQCWTAMPPDDSPATTPTAGDHFKGYTYVAPNPWLSSG. 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01469 431 MobiDBLite consensus disorder prediction 18 94 - -
Seca12g01469 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Seca12g01469 431 SMART pkinase_C_6 364 423 IPR000961 GO:0004674|GO:0005524|GO:0006468
Seca12g01469 431 SUPERFAMILY Protein kinase-like (PK-like) 102 416 IPR011009 -
Seca12g01469 431 Pfam Protein kinase C terminal domain 384 421 IPR017892 GO:0004674|GO:0005524|GO:0006468
Seca12g01469 431 SMART serkin_6 103 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g01469 431 ProSiteProfiles AGC-kinase C-terminal domain profile. 364 431 IPR000961 GO:0004674|GO:0005524|GO:0006468
Seca12g01469 431 Pfam Protein kinase domain 103 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g01469 431 ProSitePatterns Protein kinases ATP-binding region signature. 109 136 IPR017441 GO:0005524
Seca12g01469 431 FunFam Non-specific serine/threonine protein kinase 101 211 - -
Seca12g01469 431 Gene3D Transferase(Phosphotransferase) domain 1 187 382 - -
Seca12g01469 431 MobiDBLite consensus disorder prediction 18 45 - -
Seca12g01469 431 FunFam Non-specific serine/threonine protein kinase 187 382 - -
Seca12g01469 431 Gene3D Phosphorylase Kinase; domain 1 101 405 - -
Seca12g01469 431 ProSiteProfiles Protein kinase domain profile. 103 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g01469 431 PANTHER RIBOSOMAL PROTEIN S6 KINASE 55 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01469 Seca-Chr12 14841095 14845218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01469 41 424 AGC Kinase Gene Family AT3G08720 61.845 1.80e-177 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Seca12g01469 Pkinase 5.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01469 K04688 - gmx:100798259 659.062