Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01457 ATGTCTCTCGGATCTCCCCTTCCGGTTCCCGCCGACCGATTCTCGCCGTCGCCGGAACCCAATCCCGAAAACCACATCTCCGCTTCCGAGAACCACGACGCAGCTCCCAAGGAGGAAACCGCCGCCGCTGCTCCTCCCCCGACAACCAGGAGCAACCGCCCCTCCCGCGCGTGCACTATTCGCGCCGCTTCCCGCCTCTATTCCTCGCCGCCGGCGATCGAACGCAAGCCGAAGAAGGAGGTCCGGAGGGAGGAATCGCCGCCGGCGCAATGCAGCAAGATCGTTACGCCACTGGTGGAACCGCCGTCGTCGCCGTCGCAGTTGCAACGGTGGAACCTGAGGTCCATGTGGGAGTTAGCTTCCATACTCAATTTCTTACGTAAGCTTGGTTTTTTTTTTTGCTATCTCTTGTTGTTGCAGCTGTTTTGGCCTCTATTGAATATCTCACTAGAATTCTCTGCTGAAGAGTTCGAGACAGCTCTTCTTACCCCCAATGACACTTTGTTTCATATACACATGCCTTTGCTAAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGTGATACGTGGATAACCGTATTATGCAGGAAATTGAGAGATTGGTGGCATTGGGTTGCGGATGGGGATATTCCAATTGTTGCTTCACATGGGGCGGAGATTGAAGTATATAAATCACTTGATCCAGGGGTCCGTGTTGTCATTTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTATATTGACAACTCAATCAAACACGGTGTTCAACTTTCAACATTCCGGAAAGAGCGTATTGGAGGTGATTCACATGGAGTTTCTTATTGGTATGAAGATGACCCCATCATTGGCCATAGGCTGTATCGAGAAATAAGGAAAACTGAAGTGATTCAATTGAAGAAAGGGAAACCAAGAGGTTCCCAGGTTCTTTCTAATACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAAAACAGAGGCTTCAGTGGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCATAAGAAAAAAGAGAGGCTGCTGAAAAAGCAACACAGAGAAGCTCTTCTTCTTGATAATTACTTGGTTGTTGATGGGCTTGCTCCTGGGCGTTCACTTCGTGACAGGAAACGTGTTACCTACACCTTTGATGATTATGATCGGTCCATCAATGAGGCAATTAAAGTAACCAAGCGGAAACAGCCATCCCCAGAACCTATGCCCAGGAGAGAATCAGCAGCTAAAACTGAAGCTTTGACTAATGGTAACCATGATCCTTCACATGCTTCACAAGATCTGAATTTTGGTATGCCATCTCCAGAATCACCTGACTATGATGATGAGGAGGAAGAAGAAGATTATAAAACTGACACATTGGATCGAAGCAATCGTCGAAGACAGAGACCTAAGCGGTATTCAGAGAATGACTTCATTGAAGAAATATCTGATAATGAGGCAGACTTTGACAGTGATGATGATATCGTTGGAGAAGTCGTATATGATGAAGAATATCTCAAGAAACGCAAGCAGAGAAGGAAGCATTCTAGTAGCTCTGAAGAAGATGAAGAATATCAATGGGATGAAGATAATGTTGAAGAAGAAGAGGAAGATGGTGATGATGAAGATTCCTTGAGCATCAGTGAGGATAGTGACAAACCTCGTAAAGTCAAACAATTGTCAGGCCGTACTAGGAGGGGAACTAAACTCAGGTCTGTGGATGAGATTCAATCAGGTCTAAGACGCAGTAAGAGGTCAACTAGAACTCGCATAGATTACCGACAATATGAGGCGTCAGAATCAGAAACAGATAATAAACCTGAGAAGTCTAATGTATCAGGTGATCACTCAGATCCCAGTGAGATTGGGAGTGAGAATGGGGAATATATGATGGAAAGTGAAGATTCAGGTAGCAGTGATGAAGAAGATCAGGAAATGAAAGTAGATGAGCCTGTTACACATCCTGCAGTAGTAGAGAATGAACAAAACCAGCCTCCTGAAAAGTCAAGTAGTCCTGGTCAGGAGGAAGTTGAGGGCACAGGAAAGAGGCGTTTCCTTGATTTGAATGAGCTTGCACCTAGCTCTGGTTTTGATGATGGTCCAAATACAATAATGAAAGATGAAGACAATGACTACTGA 2214 0.449 MSLGSPLPVPADRFSPSPEPNPENHISASENHDAAPKEETAAAAPPPTTRSNRPSRACTIRAASRLYSSPPAIERKPKKEVRREESPPAQCSKIVTPLVEPPSSPSQLQRWNLRSMWELASILNFLRKLGFFFCYLLLLQLFWPLLNISLEFSAEEFETALLTPNDTLFHIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVADGDIPIVASHGAEIEVYKSLDPGVRVVILKALCDIRVEQEDIRSYIDNSIKHGVQLSTFRKERIGGDSHGVSYWYEDDPIIGHRLYREIRKTEVIQLKKGKPRGSQVLSNTSYQWEAVATNFDEFQDVSEKLFSSKNKTEASVGKKLKIDMLPEIEKVHKKKERLLKKQHREALLLDNYLVVDGLAPGRSLRDRKRVTYTFDDYDRSINEAIKVTKRKQPSPEPMPRRESAAKTEALTNGNHDPSHASQDLNFGMPSPESPDYDDEEEEEDYKTDTLDRSNRRRQRPKRYSENDFIEEISDNEADFDSDDDIVGEVVYDEEYLKKRKQRRKHSSSSEEDEEYQWDEDNVEEEEEDGDDEDSLSISEDSDKPRKVKQLSGRTRRGTKLRSVDEIQSGLRRSKRSTRTRIDYRQYEASESETDNKPEKSNVSGDHSDPSEIGSENGEYMMESEDSGSSDEEDQEMKVDEPVTHPAVVENEQNQPPEKSSSPGQEEVEGTGKRRFLDLNELAPSSGFDDGPNTIMKDEDNDY. 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01457 737 MobiDBLite consensus disorder prediction 420 438 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 1 90 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 420 737 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 592 640 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 442 463 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 682 701 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 547 572 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 482 504 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 505 524 - -
Seca12g01457 737 MobiDBLite consensus disorder prediction 72 87 - -
Seca12g01457 737 PANTHER REMODELING AND SPACING FACTOR 1 49 733 IPR028938 GO:0006355|GO:0031213
Seca12g01457 737 MobiDBLite consensus disorder prediction 525 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01457 Seca-Chr12 14706766 14715233 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01457 - - gmx:100795519 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01457 12 14706766 14715233 Seca12g01457 12 14706766 14715233 ECH
Seca12g01457 12 14706766 14715233 Seca4g03179 4 54420515 54428646 PCT