Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01451 ATGACAAAAAAGAGCTTAGATGGAAATCATGATGCTGACTGGATGCCTAAATGGGTATTGAACTATGATTCTGGTGTGCAGGAATGGACTACTCCACCTCCTTATATCTCTGTTTGCTACTATGGTCAGCATTATCATTGCTTTGCTTATAGCCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTGAAGATAATTGGTGGTTGGGCGGATGTTCTGACAATGTGTGAAAGAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAG 285 0.4035 MTKKSLDGNHDADWMPKWVLNYDSGVQEWTTPPPYISVCYYGQHYHCFAYSHDHEQWIMYDDKTVKIIGGWADVLTMCERGHLQPQVLFFEAVN. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01451 94 Gene3D Cysteine proteinases 35 93 - -
Seca12g01451 94 PANTHER UBIQUITIN SPECIFIC PROTEINASE 38 93 - -
Seca12g01451 94 SUPERFAMILY Cysteine proteinases 44 93 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01451 Seca-Chr12 14641530 14642263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01451 38 91 C2H2 Transcription Factor Family AT3G47890 79.630 1.53e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01451 - - lja:Lj4g3v1601430.2 132.88